Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04008 and BPUM_2404

See DNA alignment / Visit BSNT_04008 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:31
# Commandline: needle
#    -asequence pep-align/BSNT_04008___yrvD.1.24716.seq
#    -bsequence pep-align/BPUM_2404___yrvD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04008___yrvD-BPUM_2404___yrvD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04008___yrvD-BPUM_2404___yrvD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04008___yrvD
# 2: BPUM_2404___yrvD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      63/117 (53.8%)
# Similarity:    81/117 (69.2%)
# Gaps:          10/117 ( 8.5%)
# Score: 288.0
# 
#
#=======================================

BSNT_04008___      1 MNK-QWTIIFALIFTLIVAIFAVINVRSVEVDYLFGRSEWPLILVILGSV     49
                     ||| |||||.|.||.|||::|||||||.|:||||||.:||||||||:|||
BPUM_2404___y      1 MNKQQWTIILAFIFVLIVSVFAVINVRPVQVDYLFGSAEWPLILVIIGSV     50

BSNT_04008___     50 LMGALIVFSVGIFQVMKLKREIKTLRKENRTA-----IHKQEDTHLADQ-     93
                     |||.|||...||||::|||||:|.|:.|...|     .:|:.|..:..: 
BPUM_2404___y     51 LMGGLIVAFAGIFQIVKLKRELKALKAERAAAPAPVVSNKKIDKDVQKKP    100

BSNT_04008___     94 --TDTQDASAMIEKKD-    107
                       |..::..|..::|: 
BPUM_2404___y    101 NVTPLKEQPASFDRKEK    117


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