Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04006 and BPUM_2402

See DNA alignment / Visit BSNT_04006 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence pep-align/BSNT_04006___apt.1.24716.seq
#    -bsequence pep-align/BPUM_2402___apt.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04006___apt-BPUM_2402___apt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04006___apt-BPUM_2402___apt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04006___apt
# 2: BPUM_2402___apt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity:     156/170 (91.8%)
# Similarity:   167/170 (98.2%)
# Gaps:           0/170 ( 0.0%)
# Score: 819.0
# 
#
#=======================================

BSNT_04006___      1 MDLKQYVTIVPDYPKEGVQFKDITTLMDKGDVYRYATDQIVEYAKEKQID     50
                     ||||||||:|||||||||||||||||||||:|||||||||||||||:.||
BPUM_2402___a      1 MDLKQYVTVVPDYPKEGVQFKDITTLMDKGEVYRYATDQIVEYAKERDID     50

BSNT_04006___     51 LVVGPEARGFIIGCPVAYALGVGFAPVRKEGKLPREVIKVDYGLEYGKDV    100
                     |:|||||||||||||||||||||||||||||||||||:||:|||||||||
BPUM_2402___a     51 LIVGPEARGFIIGCPVAYALGVGFAPVRKEGKLPREVVKVEYGLEYGKDV    100

BSNT_04006___    101 LTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLIEL    150
                     ||||||||:||||||||||||||||||||:||||||||||||||||||||
BPUM_2402___a    101 LTIHKDAIRPGQRVLITDDLLATGGTIEASIKLVEELGGVVAGIAFLIEL    150

BSNT_04006___    151 SYLDGRNKLEDYDILTLMKY    170
                     :|||||.||:.|||||||:|
BPUM_2402___a    151 TYLDGRKKLDGYDILTLMQY    170


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