Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04006 and BPUM_2402

See Amino acid alignment / Visit BSNT_04006 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence dna-align/BSNT_04006___apt.1.24716.seq
#    -bsequence dna-align/BPUM_2402___apt.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04006___apt-BPUM_2402___apt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04006___apt-BPUM_2402___apt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04006___apt
# 2: BPUM_2402___apt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 514
# Identity:     418/514 (81.3%)
# Similarity:   418/514 (81.3%)
# Gaps:           2/514 ( 0.4%)
# Score: 1694.0
# 
#
#=======================================

BSNT_04006___      1 ATGGATTTAAAACAATACGTAACAATTGTACCGGATTACCCGAAAGAGGG     50
                     |||||||||||||||||.||.|||.|||||||.||.|||||.||.||.||
BPUM_2402___a      1 ATGGATTTAAAACAATATGTGACAGTTGTACCTGACTACCCAAAGGAAGG     50

BSNT_04006___     51 CGTGCAATTTAAAGATATTACGACACTGATGGATAAAGGCGATGTATACC    100
                     .||.|||||||||||||||||.||..|.||||||||||||||.||.||||
BPUM_2402___a     51 TGTACAATTTAAAGATATTACAACGTTAATGGATAAAGGCGAAGTGTACC    100

BSNT_04006___    101 GCTATGCCACAGATCAAATTGTTGAATATGCGAAAGAAA-AGCAAATTGA    149
                     |.|||||.||.||||||||.||||||||.|||||||||| || |.|||||
BPUM_2402___a    101 GTTATGCAACGGATCAAATCGTTGAATACGCGAAAGAAAGAG-ACATTGA    149

BSNT_04006___    150 TTTGGTCGTTGGCCCTGAAGCGCGCGGCTTTATTATCGGCTGTCCCGTTG    199
                     |.|..|||||||.|||||||||||.||.||.|||||.|||||.||.||.|
BPUM_2402___a    150 TCTCATCGTTGGACCTGAAGCGCGTGGATTCATTATTGGCTGCCCTGTAG    199

BSNT_04006___    200 CTTACGCGCTTGGCGTAGGTTTTGCGCCGGTCCGCAAAGAAGGCAAGTTG    249
                     |.|||||.|||||.|||||||||||.|||||.||.||||||||.|||.|.
BPUM_2402___a    200 CATACGCACTTGGTGTAGGTTTTGCACCGGTTCGTAAAGAAGGAAAGCTT    249

BSNT_04006___    250 CCTCGTGAAGTAATCAAAGTGGATTATGGCTTGGAATACGGAAAAGACGT    299
                     |||||||||||..|.|||||.||.||.|||||.|||||.||.|||||.||
BPUM_2402___a    250 CCTCGTGAAGTCGTTAAAGTCGAATACGGCTTAGAATATGGGAAAGATGT    299

BSNT_04006___    300 ATTAACGATCCACAAAGATGCGATTAAGCCTGGTCAGCGTGTGCTTATTA    349
                     |||||||||.||.||||||||||||...||||||||||||||..|.||.|
BPUM_2402___a    300 ATTAACGATTCATAAAGATGCGATTCGTCCTGGTCAGCGTGTATTGATCA    349

BSNT_04006___    350 CGGATGACCTGCTTGCGACAGGCGGCACAATTGAAGCGACAATCAAACTT    399
                     |.||||||.|.||||||||.||.||.||||||||||||.|.|||||.|||
BPUM_2402___a    350 CAGATGACTTACTTGCGACTGGTGGAACAATTGAAGCGTCCATCAAGCTT    399

BSNT_04006___    400 GTTGAAGAACTTGGCGGCGTTGTTGCTGGTATCGCTTTCTTAATCGAGCT    449
                     ||.||.|||.|.|||||||||||.||.||.||.||.|||||.||.|||||
BPUM_2402___a    400 GTAGAGGAATTGGGCGGCGTTGTGGCAGGAATTGCATTCTTGATTGAGCT    449

BSNT_04006___    450 TTCTTACCTTGACGGCAGAAATAAGCTCGAAGATTACGACATCTTAACAT    499
                     ..|.||.||.|||||||||||.|||||.||.|.||||||||||||.||.|
BPUM_2402___a    450 GACGTATCTGGACGGCAGAAAGAAGCTTGACGGTTACGACATCTTGACGT    499

BSNT_04006___    500 TGATGAAATACTAA    513
                     |.|||.||||||||
BPUM_2402___a    500 TAATGCAATACTAA    513


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