Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03993 and BPUM_2392
See
DNA alignment /
Visit
BSNT_03993 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence pep-align/BSNT_03993___yrvO.1.24716.seq
# -bsequence pep-align/BPUM_2392___yrvO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03993___yrvO-BPUM_2392___yrvO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03993___yrvO-BPUM_2392___yrvO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03993___yrvO
# 2: BPUM_2392___yrvO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 380
# Identity: 257/380 (67.6%)
# Similarity: 312/380 (82.1%)
# Gaps: 1/380 ( 0.3%)
# Score: 1372.0
#
#
#=======================================
BSNT_03993___ 1 MERIYLDHAATSPMDERVLEKMIPHFSGSFGNPSSIHSFGRESRKWVDEA 50
|||||||||||:|||:|:::||||:|:..|||||||||:|||:|||:|||
BPUM_2392___y 1 MERIYLDHAATTPMDQRIVDKMIPYFTEIFGNPSSIHSYGREARKWLDEA 50
BSNT_03993___ 51 RAQIAAEIGAAEQEIIFTSGGTEADNLAIMGTALARKDLGRHIITTKIEH 100
|..||.|:....||:|.||||||||||||.|.|:||:..|:||||.|.||
BPUM_2392___y 51 REVIAGELHCKPQEVILTSGGTEADNLAITGVAMARQHEGKHIITAKTEH 100
BSNT_03993___ 101 HAVLHTCEKLEEDGFDITYLDVDQNGRVSAKQVKEALRDDTILVTVMYGN 150
||||||||:||:.|||:||||||:.|.:..:|:|:||||||||||:||||
BPUM_2392___y 101 HAVLHTCERLEKLGFDVTYLDVDETGLIHLEQLKQALRDDTILVTIMYGN 150
BSNT_03993___ 151 NEVGTVQPIEEIGELLKEHKAYFHTDAVQAFGLLPIDVKNSHIDLLSVSG 200
||.|.:|||::||||:..|.|:||||||||||.:||||.:.||||||.||
BPUM_2392___y 151 NETGVIQPIKDIGELMHHHTAHFHTDAVQAFGTMPIDVADLHIDLLSASG 200
BSNT_03993___ 201 HKLNGPKGTGFLYASKDVKLSPLLFGGEQERKRRAGTENVPGIVGLKEAI 250
||||||.||||||.::.|||||.|||||||||||||||||.|||||.||:
BPUM_2392___y 201 HKLNGPMGTGFLYVNEGVKLSPQLFGGEQERKRRAGTENVAGIVGLAEAV 250
BSNT_03993___ 251 KLSSEERDEKNEKYQSFKAIFADTLRDAGVAFEINGDKEHSLPHVLNLYF 300
:|:.:.|.||...|...|.|......:..:.|.|||..:.:|||:||::|
BPUM_2392___y 251 QLTKQNRREKAMHYGKLKEIMLQVFDEESLIFSINGHPKETLPHILNVHF 300
BSNT_03993___ 301 PGVSVEALLVNLDMAGVAVSSGSACTAGSVLPSHVLTAMFGEESDRLTSS 350
||||:|:|||||||.|:|||||||||||||||||||:||:|||:|:||||
BPUM_2392___y 301 PGVSIESLLVNLDMEGIAVSSGSACTAGSVLPSHVLSAMYGEEADKLTSS 350
BSNT_03993___ 351 IRISFGLGNTAEQVKTAAKHVADVVKRLT- 379
:||||||||..:.||.||:.:|.|||||.
BPUM_2392___y 351 VRISFGLGNEEDHVKQAARKIAAVVKRLAK 380
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.