Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03985 and BPUM_2385
See
DNA alignment /
Visit
BSNT_03985 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:28
# Commandline: needle
# -asequence pep-align/BSNT_03985___glnP.1.24716.seq
# -bsequence pep-align/BPUM_2385___glnP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03985___glnP-BPUM_2385___glnP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03985___glnP-BPUM_2385___glnP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03985___glnP
# 2: BPUM_2385___glnP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 173/218 (79.4%)
# Similarity: 195/218 (89.4%)
# Gaps: 2/218 ( 0.9%)
# Score: 851.5
#
#
#=======================================
BSNT_03985___ 1 MDFIGAYSQEHLAFLWDGFLVTLYVAFISIILSFFFGLIAGTLRYAKVPV 50
|||:|||..:|||||.:||.|||.||||||||||..||:.||||:|::|:
BPUM_2385___g 1 MDFLGAYQPDHLAFLLEGFAVTLKVAFISIILSFLIGLVIGTLRFAQIPI 50
BSNT_03985___ 51 LSQLIAVLVETIRNLPLLLIIFFTFFALPEIGIKLEITAAAITALTIFES 100
||:::||:||||||||||||||||:||||||||||.|||:||.|||:|||
BPUM_2385___g 51 LSKILAVVVETIRNLPLLLIIFFTYFALPEIGIKLSITASAIAALTVFES 100
BSNT_03985___ 101 AMLSEIIRSGLKSIDKGQIEAARSSGLSYTQTLFFIVMPQALRRMVPPIV 150
||||||||||||||||||||||||||.:|.|||..|:|||||||||||||
BPUM_2385___g 101 AMLSEIIRSGLKSIDKGQIEAARSSGFTYIQTLKMIIMPQALRRMVPPIV 150
BSNT_03985___ 151 SQFISLLKDTSLAVVIALPELIHNAQIINGQSADGSYFFPIFLLAALMYF 200
|||||||||||||||||||||:|:|||:||||. ||..|||||||:|||
BPUM_2385___g 151 SQFISLLKDTSLAVVIALPELLHHAQILNGQSQ--SYLLPIFLLAAMMYF 198
BSNT_03985___ 201 AVNYSLSLAARRLEVRQT 218
.||:||||.|||||.||.
BPUM_2385___g 199 VVNFSLSLLARRLEYRQA 216
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.