Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03985 and BPUM_2385
See
Amino acid alignment /
Visit
BSNT_03985 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:28
# Commandline: needle
# -asequence dna-align/BSNT_03985___glnP.1.24716.seq
# -bsequence dna-align/BPUM_2385___glnP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03985___glnP-BPUM_2385___glnP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03985___glnP-BPUM_2385___glnP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03985___glnP
# 2: BPUM_2385___glnP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 686
# Identity: 466/686 (67.9%)
# Similarity: 466/686 (67.9%)
# Gaps: 64/686 ( 9.3%)
# Score: 1429.5
#
#
#=======================================
BSNT_03985___ 1 TTGGATTTCATCGGTGCTTATTCACAG---GAGCATTTAGCGTTTTTATG 47
.|||||||..|.|||||.|| .||| ||.|||.|.||.||||||..
BPUM_2385___g 1 ATGGATTTTCTAGGTGCCTA---CCAGCCTGATCATCTCGCCTTTTTACT 47
BSNT_03985___ 48 GGATGGCTTT-CTCGTCACCTTGTACGTTGCTTTCATCTCCATCATTCTG 96
.||.||.||| || ||||||||..|.||.|||||.||||||||||||.||
BPUM_2385___g 48 TGAAGGATTTGCT-GTCACCTTAAAAGTGGCTTTTATCTCCATCATTTTG 96
BSNT_03985___ 97 AGCTTTTTCTTCGGTTTAATCGCAGGCACCCTGCGATATGC-GAAAGTAC 145
||||||.||.|.||.|||.||...|||||..||||.|..|| .|||.|
BPUM_2385___g 97 AGCTTTCTCATTGGATTAGTCATTGGCACATTGCGGTTCGCTCAAATT-- 144
BSNT_03985___ 146 CCGTTCTTTCTCAATTGA---TTGCGGTTCTCGTTGAAACGATCAGAAAC 192
|||.| |||.|||| .|| ||||.||..||||.|||||.||..|||||
BPUM_2385___g 145 CCGAT-TTTATCAA-AGATACTTGCAGTCGTCGTCGAAACCATTCGAAAC 192
BSNT_03985___ 193 CTCCCCTTGCTGTTA---ATTATTTTCTTTACGTTTTTTGCCCTTCCGGA 239
.|.|| |||.||| ||.|||||.||.||.|.||||||..|.||.||
BPUM_2385___g 193 TTGCC---GCTCTTATTGATCATTTTTTTCACATATTTTGCATTGCCCGA 239
BSNT_03985___ 240 AATTGGTATTAAGCTTGA-AATTACAGCTGCTGCAATTACAGCACTAACG 288
|||.||.||||||| ||| .||||||||..|.||.||..||||..||||.
BPUM_2385___g 240 AATCGGCATTAAGC-TGAGCATTACAGCCTCGGCTATAGCAGCTTTAACC 288
BSNT_03985___ 289 ATTTTTGAATCCGCTATGCTATCTGAAATTATCCGAAGCGGACTGAAATC 338
.|.||||||||.||.|||||.||.||||||||.|||||.||..|.|||||
BPUM_2385___g 289 GTATTTGAATCAGCAATGCTGTCAGAAATTATTCGAAGTGGTTTAAAATC 338
BSNT_03985___ 339 AATTGACAAAGGACAAATTGAAGCGGCGCGCTCCTCCGGGCTGAGCTATA 388
||||||.||.||.|||||.|||||.||..|.|||||.||..|.|.|||||
BPUM_2385___g 339 AATTGATAAGGGGCAAATCGAAGCCGCCAGGTCCTCTGGTTTCACCTATA 388
BSNT_03985___ 389 CACAGACCCTGTT---CTTTATCGTTATGCCGCAAGCGCTTCGCCGCATG 435
..||.|| ||| ..|.||..||||||||||.||..|.|||||.|||
BPUM_2385___g 389 TCCAAAC---GTTAAAAATGATTATTATGCCGCAGGCTTTACGCCGAATG 435
BSNT_03985___ 436 GTTCCGCCCATCGTAAGCCAGTTTATTTCTTTATTAAAAGATACATCGCT 485
||.|||||.||.||.||.||.||.||.|||.|.|||||||||||.||.||
BPUM_2385___g 436 GTGCCGCCAATTGTTAGTCAATTCATCTCTCTTTTAAAAGATACGTCACT 485
BSNT_03985___ 486 CGCTGTTGTGATCGCCCTGCCTGAACTGATT-CACAACGCGCAAATTATT 534
.||||||||.||.||.||.||.||||| ||| ||..||||.|||| ||||
BPUM_2385___g 486 AGCTGTTGTCATTGCACTTCCAGAACT-ATTGCATCACGCTCAAA-TATT 533
BSNT_03985___ 535 -AACGGCCAAAGCGCAGACGGCAGTTATTTTTTCCCGATCTTTTTACTTG 583
|||||.||.||| ||..| |||.||..|.||.||.||..||.|.|
BPUM_2385___g 534 AAACGGTCAGAGC-CAATC-----TTACTTACTGCCCATTTTCCTATTAG 577
BSNT_03985___ 584 CGGCCCTTATGTATTTCGCAGTCAACTACAGCCTTTC---ACTCGCAGCA 630
||||..|.||||||||.|..|||||.|.||||.|.|| ||||||
BPUM_2385___g 578 CGGCGATGATGTATTTTGTCGTCAATTTCAGCTTATCATTACTCGC---- 623
BSNT_03985___ 631 AGACGCC--------TCGAGGTCCGGCA-AACATAG 657
.|||| |..||| |.|||| ||
BPUM_2385___g 624 --CCGCCGATTAGAATATAGG-CAGGCATAA----- 651
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.