Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03983 and BPUM_2383

See DNA alignment / Visit BSNT_03983 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:28
# Commandline: needle
#    -asequence pep-align/BSNT_03983___glnH.1.24716.seq
#    -bsequence pep-align/BPUM_2383___glnH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03983___glnH-BPUM_2383___glnH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03983___glnH-BPUM_2383___glnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03983___glnH
# 2: BPUM_2383___glnH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     191/277 (69.0%)
# Similarity:   221/277 (79.8%)
# Gaps:          12/277 ( 4.3%)
# Score: 927.0
# 
#
#=======================================

BSNT_03983___      1 MKKI--FSLALISLFAVILLAAC--SSKGSNGEASKESKKDTLAAIKDND     46
                     |||:  |.|.|.....:..|.||  :.|||. :|.:.|..:|   |:.:.
BPUM_2383___g      1 MKKMKRFGLLLFMTCCIAALTACGFAEKGST-DAKQGSSLET---IQKDK     46

BSNT_03983___     47 KIVFGVKTDTRLFGLKNPSSGEIEGFDIDIAKQIAKDILVDEKKAEFKEV     96
                     |::||||.|||||||||||||:||||||||||.|||:||.||.|||||||
BPUM_2383___g     47 KMIFGVKNDTRLFGLKNPSSGDIEGFDIDIAKAIAKEILGDEGKAEFKEV     96

BSNT_03983___     97 TSKTRIPMLQNGDIDAIVATMTITDERKKEVDFSDVYFEAGQSLLVKKGS    146
                     |||||||:||.|||.|||||||||:||||||:||||||||||||||||||
BPUM_2383___g     97 TSKTRIPLLQKGDIHAIVATMTITEERKKEVNFSDVYFEAGQSLLVKKGS    146

BSNT_03983___    147 KIKSVEDLDKGSKVLAVKGSTSSQNIREKAPEASVLEFENYAEAFTALKS    196
                     .|:|::||.||:|||||||||||||||||||||||||||||.||||||||
BPUM_2383___g    147 DIQSIDDLKKGTKVLAVKGSTSSQNIREKAPEASVLEFENYQEAFTALKS    196

BSNT_03983___    197 GQGDALTTDNAILYGMADENKNYQLTGKPFTDEPYGIAVKKGQSALAKEI    246
                     .||..||||||||:|||||:.||::.|..|||||||||||||...|...|
BPUM_2383___g    197 NQGQVLTTDNAILFGMADEDSNYEVVGGTFTDEPYGIAVKKGDKELTTAI    246

BSNT_03983___    247 NASLKKMKSDGRYDEIYKKWIKEDPAE    273
                     |.:||.:|.:|.||:|::||||:    
BPUM_2383___g    247 NKALKTLKDNGEYDKIHQKWIKK----    269


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