Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01760 and BPUM_2376

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence pep-align/BSNT_01760___yhfU.1.24716.seq
#    -bsequence pep-align/BPUM_2376___yhfU.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01760___yhfU-BPUM_2376___yhfU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01760___yhfU-BPUM_2376___yhfU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01760___yhfU
# 2: BPUM_2376___yhfU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity:     104/189 (55.0%)
# Similarity:   136/189 (72.0%)
# Gaps:           4/189 ( 2.1%)
# Score: 528.0
# 
#
#=======================================

BSNT_01760___      1 MLKLIDMMHIAIFTALMAVLGFMPPLFLSFTPVPITLQTLGVMLAGSILR     50
                      :::.|||.:|:.||::.:||.:||:.|:||||||||||.|::|||.:|:
BPUM_2376___y      1 -MRIQDMMQMALMTAVIGMLGLIPPILLTFTPVPITLQTAGLLLAGGLLK     49

BSNT_01760___     51 PKSAFLSQLVFLLLVAFGAPLLPGGRGGFGVFFGPSAGFLIAYPLASWLI    100
                     ||.|.:|.|:|||:||.|||||.|.|||.|||||||.|||:|||.|:.:|
BPUM_2376___y     50 PKQALISLLLFLLVVAAGAPLLSGARGGIGVFFGPSGGFLLAYPAAALMI     99

BSNT_01760___    101 SLAANRLRKVTVLRLFFTHIVFGIIFIYLLGIPVQAFIMHIDLSQAAFMS    150
                     ||..|||:|||.||||....:..|..:||.|||.||.||:|.::|||.:|
BPUM_2376___y    100 SLWINRLQKVTTLRLFVIFAICSIGILYLCGIPFQAMIMNIKVTQAALLS    149

BSNT_01760___    151 LAYVPGDLIKAAVSAFLAIKITQALSLSDTMFTKGG---    186
                     |.|:|||||||.:.|.|.:||..|:|.......||.   
BPUM_2376___y    150 LIYIPGDLIKAGICAVLTVKIIAAMSYRKRDVNKGRRAV    188


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