Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03973 and BPUM_2373
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence pep-align/BSNT_03973___yrrL.1.24716.seq
# -bsequence pep-align/BPUM_2373___yrrL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03973___yrrL-BPUM_2373___yrrL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03973___yrrL-BPUM_2373___yrrL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03973___yrrL
# 2: BPUM_2373___yrrL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 362
# Identity: 226/362 (62.4%)
# Similarity: 277/362 (76.5%)
# Gaps: 4/362 ( 1.1%)
# Score: 1182.5
#
#
#=======================================
BSNT_03973___ 1 MYINQQKKSFFNKKR--IILSSIVVLFLIIGGAFLYGKSLLEPVEKDSKT 48
|:..|:|:.||.:|. ::||.:.|:.:.....|||.||.|.||::.||.
BPUM_2373___y 1 MFSEQKKRPFFKRKMGIVLLSVLAVIIIAALSGFLYVKSALGPVDQKSKQ 50
BSNT_03973___ 49 TVNINIPSGSSVSAIASILKKNDVIKSEKAFQYYVKYKGASGFQAGFYHL 98
|:||:||:|:||..||.|||:|.:|.::..|.||.|||.||||:||::||
BPUM_2373___y 51 TINIHIPNGTSVREIAGILKENGLISNDTIFTYYAKYKNASGFKAGYFHL 100
BSNT_03973___ 99 NKGMDLDAIIQKLTSGATGYAFQITVTEGAQLTQIAAAIADETKYSKKQV 148
.:.||.|.:|||||||.|.||||:.:.||.||:.|||.||::|.:|.|:|
BPUM_2373___y 101 KQTMDADTLIQKLTSGGTDYAFQLVIPEGKQLSDIAAVIANQTNFSAKEV 150
BSNT_03973___ 149 IAKLDDETFINQLKKEFPDTVTNDVFNKNIKHPLEGYLFPATYPFNDPDT 198
.|||||..||..|.|::|.|||:.|..|.:|||||||||||||||...|.
BPUM_2373___y 151 EAKLDDPAFIKTLMKKYPKTVTSQVNGKQVKHPLEGYLFPATYPFYREDE 200
BSNT_03973___ 199 SLEDIIKAMIKQTNSYVETYKSEMKKNKVSVHKLLTMASLIEEEATEKAD 248
|||.||:.|||||:.||:||:.:|||..:|:|.:||||||||.|||||.|
BPUM_2373___y 201 SLETIIETMIKQTDQYVKTYEKDMKKRNMSIHDVLTMASLIEMEATEKTD 250
BSNT_03973___ 249 RHKIASVFYNRLKKKMPLQTDPTVLYAAGKHKDRVLYKDLEIDSPYNTYK 298
|.||:|||||||||.||||||||||||.|:||.||.||||::.||||||.
BPUM_2373___y 251 RAKISSVFYNRLKKDMPLQTDPTVLYALGEHKSRVYYKDLKVKSPYNTYN 300
BSNT_03973___ 299 NTGLTPGPIANAGMSSWEAALHPDKTDYLYFLAKSNGEVVFTKTLKEHNK 348
|.||.||||||||.|||:|||||:||||:|||||.||||||||||.||||
BPUM_2373___y 301 NKGLPPGPIANAGESSWKAALHPEKTDYVYFLAKKNGEVVFTKTLNEHNK 350
BSNT_03973___ 349 AKEKYISSKNEK 360
||.|||:...
BPUM_2373___y 351 AKAKYITGSK-- 360
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