Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03971 and BPUM_2372
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence pep-align/BSNT_03971___yrrM.1.24716.seq
# -bsequence pep-align/BPUM_2372___yrrM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03971___yrrM-BPUM_2372___yrrM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03971___yrrM-BPUM_2372___yrrM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03971___yrrM
# 2: BPUM_2372___yrrM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity: 147/221 (66.5%)
# Similarity: 181/221 (81.9%)
# Gaps: 4/221 ( 1.8%)
# Score: 774.0
#
#
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BSNT_03971___ 1 MTDRYEQINDYIEALLKPRPDNVKKLEAYAEEHHVPIMEKAGMEVLLQIL 50
||...:|:|||||.|:.|.||.:.:|||||:|||||||||..:|:|||:|
BPUM_2372___y 1 MTIEDDQMNDYIEHLIHPSPDAIAQLEAYAKEHHVPIMEKVSIELLLQLL 50
BSNT_03971___ 51 SVKQPKKILEIGTAIGYSAIRMALELPSAEIYTIERNEKRHEEAVNNIKE 100
|:|:||||||:||||||||||||..||.|||:|||||.||:|||..||:|
BPUM_2372___y 51 SMKKPKKILEVGTAIGYSAIRMATALPDAEIFTIERNAKRYEEATRNIEE 100
BSNT_03971___ 101 FQLDDRIHVFYGDALELADAVHVTAPYDVIFIDAAKGQYQNFFHLYEPML 150
.:|.:|||||:|||:|.|..|...|||||||||||||||:.||.|:||||
BPUM_2372___y 101 LKLKERIHVFFGDAMESAKTVQTMAPYDVIFIDAAKGQYKRFFELFEPML 150
BSNT_03971___ 151 SPDGVIITDNVLFKGLVAEDY-SKIEPKRRRRLVAKIDEYNHWLMNHPDY 199
:.||:|||||||||||||.:| .:||.||:::|:.|||.||.|||::||:
BPUM_2372___y 151 AHDGMIITDNVLFKGLVATNYEEEIEDKRKKQLIGKIDRYNQWLMSNPDF 200
BSNT_03971___ 200 QTAIIPVGDGLAISKKKR--- 217
||.|||||||:|||.|:.
BPUM_2372___y 201 QTCIIPVGDGIAISTKRGDQS 221
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