Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03963 and BPUM_2365
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence pep-align/BSNT_03963___yrrS.1.24716.seq
# -bsequence pep-align/BPUM_2365___yrrS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03963___yrrS-BPUM_2365___yrrS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03963___yrrS-BPUM_2365___yrrS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03963___yrrS
# 2: BPUM_2365___yrrS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity: 147/236 (62.3%)
# Similarity: 179/236 (75.8%)
# Gaps: 18/236 ( 7.6%)
# Score: 737.0
#
#
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BSNT_03963___ 1 MSNNQSRYENRDKRRKANLVLNILIAIVSILIVVVAANLFI-NSPSSKDV 49
||.| ||:|:||||||||:||||||.||.:||:|||.:|.| |.|...||
BPUM_2365___y 1 MSRN-SRFEHRDKRRKANMVLNILIGIVVVLILVVATSLLIFNKPKDTDV 49
BSNT_03963___ 50 S-KDSETAQKQESPASGKTEKKSDEDIKDSKKDTSDSEKDSEKSSDSDSK 98
: ..|:|| ||:.:.::|||||:||.|||||| |||:|
BPUM_2365___y 50 ADPPSKTA-----PATSENKQKSDEDVKDQKKDTSD---------DSDAK 85
BSNT_03963___ 99 KDDSSSKKDDS-DSDSSSDSASDGLKDAKVTEGGSSSDVEKTYENPDWKA 147
|||||.:.||: .||...:...|.|||||.|:||.:|||:||||:.||:.
BPUM_2365___y 86 KDDSSDQDDDTKKSDDEKEPNKDALKDAKETDGGKTSDVDKTYESDDWEP 135
BSNT_03963___ 148 VGTEQTGEHAATYDSSSQDWAEMLKAISYATGVSTDNMTVLWLGNNGSPQ 197
|||||:|.|.|||||:|:||.||:||:|||||:|.|.|||:||||||.||
BPUM_2365___y 136 VGTEQSGSHTATYDSNSKDWKEMMKAMSYATGISEDQMTVIWLGNNGGPQ 185
BSNT_03963___ 198 DAKGKILDKATGNKYQVTITWVDEKGWKPTKVEKLK 233
||||.|.||:||.:|:|.|||||||||||.||||||
BPUM_2365___y 186 DAKGTIRDKSTGERYRVEITWVDEKGWKPVKVEKLK 221
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