Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03961 and BPUM_2363
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence pep-align/BSNT_03961___yrrT.1.24716.seq
# -bsequence pep-align/BPUM_2363___yrrT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03961___yrrT-BPUM_2363___yrrT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03961___yrrT-BPUM_2363___yrrT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03961___yrrT
# 2: BPUM_2363___yrrT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 132/215 (61.4%)
# Similarity: 158/215 (73.5%)
# Gaps: 4/215 ( 1.9%)
# Score: 669.5
#
#
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BSNT_03961___ 1 MGREFIPLFEDWAATYDQTVQGLDIQYKEAFRGYDHILDAIVSKSGTHVL 50
|||||:.||:.||.:||.||.|.|.||:|.||.|..||..||.::|.|||
BPUM_2363___y 1 MGREFLSLFDHWADSYDDTVSGHDEQYEEVFRRYSVILKEIVHRAGQHVL 50
BSNT_03961___ 51 EFGPGTGNLTAKLLDAGKTVFGIEPSPAMRKLASDKLSGRSEIV-DGDFL 99
|||.|||||||.||.|.|.|||:|||.||:|.|..| |..::. |||||
BPUM_2363___y 51 EFGSGTGNLTAALLAADKNVFGVEPSDAMKKAALQK--GIPDVFHDGDFL 98
BSNT_03961___ 100 TFPEPPFQADTIVSSYAFHHLTDEEKRAAIKQYGKYLHLHDKIVFADTVF 149
:||.|||:.|||||||||||||||||:.||..|...||...|||||||:|
BPUM_2363___y 99 SFPAPPFEPDTIVSSYAFHHLTDEEKKQAIHTYSNILHSDGKIVFADTMF 148
BSNT_03961___ 150 EDAQAYQKAIDKARSQGFYQLANDLETEHYPTLDALKEMFTAEGFAVRFT 199
::..|:|..||||::.||.|||.|||||:||::|.||::|..|||:..|.
BPUM_2363___y 149 QNQSAHQAEIDKAKAAGFDQLAEDLETEYYPSIDVLKQIFEEEGFSTSFH 198
BSNT_03961___ 200 QQNDFVWIMEAIKR- 213
|.||||||:||.||
BPUM_2363___y 199 QMNDFVWIVEAKKRE 213
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