Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03958 and BPUM_2361

See DNA alignment / Visit BSNT_03958 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:26
# Commandline: needle
#    -asequence pep-align/BSNT_03958___yrhA.1.24716.seq
#    -bsequence pep-align/BPUM_2361___yrhA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03958___yrhA-BPUM_2361___yrhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03958___yrhA-BPUM_2361___yrhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03958___yrhA
# 2: BPUM_2361___yrhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     232/307 (75.6%)
# Similarity:   274/307 (89.3%)
# Gaps:           0/307 ( 0.0%)
# Score: 1234.0
# 
#
#=======================================

BSNT_03958___      1 MTVITDITELIGNTPLLRLKNFDVPEGVAVYAKLEMMNPGGSIKDRLGDM     50
                     |.||.|||||||.||||:|....:||||.|||||||||||||||||||||
BPUM_2361___y      1 MAVIKDITELIGRTPLLKLSGIGIPEGVEVYAKLEMMNPGGSIKDRLGDM     50

BSNT_03958___     51 LIRDALDSGKVKPGGVIIEATAGNTGIGLALSARKYGLKAIFCVPEHFSR    100
                     |||:||.|||::|||.|||||||||||||||||||:.|:.|||||||||:
BPUM_2361___y     51 LIREALASGKLRPGGTIIEATAGNTGIGLALSARKHQLRTIFCVPEHFSQ    100

BSNT_03958___    101 EKQQIMQALGASIIHTPRQDGMQGAIQKAIQLESEIENSYCVLQFKNRVN    150
                     ||||:|:||||.||||||::||:|||.:|::||:.::|:||||||||:||
BPUM_2361___y    101 EKQQLMKALGAKIIHTPRKEGMKGAINRALELEASLDNAYCVLQFKNQVN    150

BSNT_03958___    151 PSTYYKTLGPEMWEALDGNIHTFVAGAGSGGTFAGTASFLKEKNPAVKTV    200
                     |.|||||||||:|..|.|||..|||||||||||.|.|::|||::||:|||
BPUM_2361___y    151 PLTYYKTLGPELWSDLQGNIDVFVAGAGSGGTFQGCAAYLKEQHPALKTV    200

BSNT_03958___    201 IVEPEGSILNGGEPHAHKTEGIGMEFIPDYMNKSHFDKIYTVTDENAFRL    250
                     :|||||||||||:|..|||||||:|||||||..:.||:||||:|.:|||:
BPUM_2361___y    201 VVEPEGSILNGGDPGPHKTEGIGLEFIPDYMESALFDEIYTVSDHDAFRM    250

BSNT_03958___    251 VKEAAEKEGLLIGSSSGAALYAALEEAKKASAGTNIVTVFPDSSDRYISK    300
                     |||||||||:||||||||||:||||||:||:.||.|||:|||||:||:||
BPUM_2361___y    251 VKEAAEKEGVLIGSSSGAALFAALEEARKAAPGTVIVTIFPDSSERYLSK    300

BSNT_03958___    301 QIYEGGI    307
                     .|||||.
BPUM_2361___y    301 GIYEGGK    307


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