Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03940 and BPUM_2356
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:25
# Commandline: needle
# -asequence pep-align/BSNT_03940___yrhH.1.24716.seq
# -bsequence pep-align/BPUM_2356___yrhH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03940___yrhH-BPUM_2356___yrhH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03940___yrhH-BPUM_2356___yrhH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03940___yrhH
# 2: BPUM_2356___yrhH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 66/209 (31.6%)
# Similarity: 106/209 (50.7%)
# Gaps: 38/209 (18.2%)
# Score: 276.0
#
#
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BSNT_03940___ 1 MLENRLYKRSDFWK-LFSR---KY--KLTKTIEHMMIDSIDIQENDRILE 44
|:::.:.|:....| |||: :| |....|....|..::|||||||||
BPUM_2356___y 1 MIQSWIGKQMREPKGLFSKWVARYMEKNHHNINEWTIQLLNIQENDRILE 50
BSNT_03940___ 45 IGIGNGTVFKSITKKLKKGSLKSIDPSKRKVRQISRANRK--NMGNGEVF 92
||.|.|.....:.:||.:|.:..:|.|:..::...|.::| ......|.
BPUM_2356___y 51 IGTGRGMTLSKVAEKLDRGKVYGVDASRHMIKYAKRKHKKLVEQDKAVVT 100
BSNT_03940___ 93 HGYPEDIPFDDRTFNKVFSLHTVQSCTNIRLALREIYRVLQIDGRFYISI 142
.|..|.:||:||:|||:|::.|:....:|...::|:|||||:||..|:|.
BPUM_2356___y 101 LGKAEHLPFEDRSFNKLFTVQTIYYLKDIEQVMKEVYRVLQVDGEVYLSF 150
BSNT_03940___ 143 DTNTGEKKKTYIQLLKDQ---------------------HFRDLSVIRRD 171
... :|:|:| |||::||...|
BPUM_2356___y 151 QQQ---------ELMKEQKRSQSFSSYSEQEISRLFSAYHFREVSVYHYD 191
BSNT_03940___ 172 SCLCIMAVK 180
:.:||.|:|
BPUM_2356___y 192 TYICIKALK 200
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