Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01394 and BPUM_2348

See DNA alignment / Visit BSNT_01394 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_01394___yfiS.1.24716.seq
#    -bsequence pep-align/BPUM_2348.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01394___yfiS-BPUM_2348.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01394___yfiS-BPUM_2348.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01394___yfiS
# 2: BPUM_2348
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity:     111/452 (24.6%)
# Similarity:   197/452 (43.6%)
# Gaps:          81/452 (17.9%)
# Score: 289.5
# 
#
#=======================================

BSNT_01394___      1 MEKPLFRNQKGLMTLLASQTISSLGDWLHILAVLTLAAFQLHASPLDMSL     50
                         :.::.:.:..||.:..|:::|:|::::| |.|..||...|.|.::.
BPUM_2348          1 ----MKKHWRDMSLLLGAIGIANIGEWIYMIA-LHLLIFQETGSVLAVTA     45

BSNT_01394___     51 LMMSFALPVIVLGPVSGLLADRFDRKTIMFLSEIGRALTVISC----VYV     96
                     :.|...:..::....||.|.||.:::.:|...:|.||: :|:|    ::.
BPUM_2348         46 VYMLRPVASLLTNSWSGSLIDRLNQRKVMISLDISRAI-LIACIPFAIFS     94

BSNT_01394___     97 SELWQLYVLLCLQSCFSSLFSPAKNGKLKELAPEAHIQQAVSASSIIDNS    146
                     ..|..|||::.|.....::|.||....:..|.|..:.::..:..|::.:.
BPUM_2348         95 GYLLTLYVIVFLIQMAQAMFHPASMVYMTGLIPADNRKRFNAIRSLLQSG    144

BSNT_01394___    147 AKIFGPALGGML-IAAVSIHSVFYINAGAFLLSAVILFFLPKDAFLQKAN    195
                     ..:.|||:.|:| :....:.|: ||||...|:||:....|| :...|.||
BPUM_2348        145 GFLLGPAVAGLLFLIGTPVFSI-YINAICLLVSALFTMCLP-NLLKQDAN    192

BSNT_01394___    196 TPQEKTSALASIKEGLQYLKRMPLLLIGLLTACVVLF-------------    232
                        :|...|:.:||..:.:.|..|....::|. .:||             
BPUM_2348        193 ---QKGFTLSMLKEDAKLVLRFSLTSRQIMTV-YLLFSAAITVLPTAIDS    238

BSNT_01394___    233 --------VLQIGDSQAIILIRSFSGAPPELAGWCMAVSGAGMLLTAAIA    274
                             ||.:.|:|..:|: |.:||.        .::|||  |.:.|.
BPUM_2348        239 LETAFAKEVLLLTDTQYGLLV-SIAGAG--------IIAGAG--LNSVIV    277

BSNT_01394___    275 GRRRITSYFLYFSAGTFLLGLATGGVPFLSGMGIAGIALFIFAFFIMGAA    324
                     .:..::   :....|:..:........|.|.:..|.:..||.|||:..|.
BPUM_2348        278 EKLTVS---IMLGVGSLFVACGYLIYAFSSTLFAAAVGFFILAFFLAFAN    324

BSNT_01394___    325 FGLVHIPFQILVQTTVPVDYSGRV--FGAIQSATTLASILGMAGGGMLAE    372
                     .|     |....||.:||:..|||  |.|:..|.....:.|.:||  ||.
BPUM_2348        325 TG-----FMTFYQTNIPVEVMGRVASFYALVEAILTIMMTGFSGG--LAH    367

BSNT_01394___    373 WIGV-------SLAFLVCGCLLILIGLITLVGKKVSESRRYLVTKSNKGA    415
                     .:.:       ||..|:...||..:....|.|||:....           
BPUM_2348        368 VLSIRTSVVIGSLCMLLVCLLLCFVIFRPLTGKKIVHPT-----------    406

BSNT_01394___    416 QG    417
                       
BPUM_2348        406 --    406


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.