Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01394 and BPUM_2348
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence pep-align/BSNT_01394___yfiS.1.24716.seq
# -bsequence pep-align/BPUM_2348.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01394___yfiS-BPUM_2348.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01394___yfiS-BPUM_2348.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01394___yfiS
# 2: BPUM_2348
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity: 111/452 (24.6%)
# Similarity: 197/452 (43.6%)
# Gaps: 81/452 (17.9%)
# Score: 289.5
#
#
#=======================================
BSNT_01394___ 1 MEKPLFRNQKGLMTLLASQTISSLGDWLHILAVLTLAAFQLHASPLDMSL 50
:.::.:.:..||.:..|:::|:|::::| |.|..||...|.|.::.
BPUM_2348 1 ----MKKHWRDMSLLLGAIGIANIGEWIYMIA-LHLLIFQETGSVLAVTA 45
BSNT_01394___ 51 LMMSFALPVIVLGPVSGLLADRFDRKTIMFLSEIGRALTVISC----VYV 96
:.|...:..::....||.|.||.:::.:|...:|.||: :|:| ::.
BPUM_2348 46 VYMLRPVASLLTNSWSGSLIDRLNQRKVMISLDISRAI-LIACIPFAIFS 94
BSNT_01394___ 97 SELWQLYVLLCLQSCFSSLFSPAKNGKLKELAPEAHIQQAVSASSIIDNS 146
..|..|||::.|.....::|.||....:..|.|..:.::..:..|::.:.
BPUM_2348 95 GYLLTLYVIVFLIQMAQAMFHPASMVYMTGLIPADNRKRFNAIRSLLQSG 144
BSNT_01394___ 147 AKIFGPALGGML-IAAVSIHSVFYINAGAFLLSAVILFFLPKDAFLQKAN 195
..:.|||:.|:| :....:.|: ||||...|:||:....|| :...|.||
BPUM_2348 145 GFLLGPAVAGLLFLIGTPVFSI-YINAICLLVSALFTMCLP-NLLKQDAN 192
BSNT_01394___ 196 TPQEKTSALASIKEGLQYLKRMPLLLIGLLTACVVLF------------- 232
:|...|:.:||..:.:.|..|....::|. .:||
BPUM_2348 193 ---QKGFTLSMLKEDAKLVLRFSLTSRQIMTV-YLLFSAAITVLPTAIDS 238
BSNT_01394___ 233 --------VLQIGDSQAIILIRSFSGAPPELAGWCMAVSGAGMLLTAAIA 274
||.:.|:|..:|: |.:||. .::||| |.:.|.
BPUM_2348 239 LETAFAKEVLLLTDTQYGLLV-SIAGAG--------IIAGAG--LNSVIV 277
BSNT_01394___ 275 GRRRITSYFLYFSAGTFLLGLATGGVPFLSGMGIAGIALFIFAFFIMGAA 324
.:..:: :....|:..:........|.|.:..|.:..||.|||:..|.
BPUM_2348 278 EKLTVS---IMLGVGSLFVACGYLIYAFSSTLFAAAVGFFILAFFLAFAN 324
BSNT_01394___ 325 FGLVHIPFQILVQTTVPVDYSGRV--FGAIQSATTLASILGMAGGGMLAE 372
.| |....||.:||:..||| |.|:..|.....:.|.:|| ||.
BPUM_2348 325 TG-----FMTFYQTNIPVEVMGRVASFYALVEAILTIMMTGFSGG--LAH 367
BSNT_01394___ 373 WIGV-------SLAFLVCGCLLILIGLITLVGKKVSESRRYLVTKSNKGA 415
.:.: ||..|:...||..:....|.|||:....
BPUM_2348 368 VLSIRTSVVIGSLCMLLVCLLLCFVIFRPLTGKKIVHPT----------- 406
BSNT_01394___ 416 QG 417
BPUM_2348 406 -- 406
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