Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02114 and BPUM_2346

See DNA alignment / Visit BSNT_02114 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_02114___yjqC.1.24716.seq
#    -bsequence pep-align/BPUM_2346___yjqC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02114___yjqC-BPUM_2346___yjqC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02114___yjqC-BPUM_2346___yjqC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02114___yjqC
# 2: BPUM_2346___yjqC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     223/278 (80.2%)
# Similarity:   249/278 (89.6%)
# Gaps:           2/278 ( 0.7%)
# Score: 1197.0
# 
#
#=======================================

BSNT_02114___      1 MFYHIKELQYQAKPAHPDPVYAKKLQEVLGGQFGEISVMMQYLFQGFNCR     50
                     ||||||||||:|||:.|||:||||||||||||:|||||||||||||||||
BPUM_2346___y      1 MFYHIKELQYEAKPSKPDPLYAKKLQEVLGGQYGEISVMMQYLFQGFNCR     50

BSNT_02114___     51 ADAKYKDLLYDVGTEEIGHVEMLATMISRLLDNAPADVQEDAYKSNPAIA    100
                     ||.||:|||:|:|||||||||||||||:||||.||...||.||:|:||:|
BPUM_2346___y     51 ADQKYRDLLFDIGTEEIGHVEMLATMIARLLDKAPVKEQEQAYESDPALA    100

BSNT_02114___    101 AVMSGMNPQHAIVSGLGAMASDSEGYPWNAKYIISSGNLLADFRANLNAE    150
                     |||.|||||||||:||||||:||:||||||||||:||||:||||||||||
BPUM_2346___y    101 AVMGGMNPQHAIVAGLGAMAADSQGYPWNAKYIIASGNLMADFRANLNAE    150

BSNT_02114___    151 AQGRLQVTRLYAMTDDPGVRDMLSFLIARDTYHQNMWYAAIKELEERERD    200
                     :||||||||||.||||.||:|||||||||||||||||.||||||||||.|
BPUM_2346___y    151 SQGRLQVTRLYEMTDDRGVKDMLSFLIARDTYHQNMWIAAIKELEEREGD    200

BSNT_02114___    201 IVVPTTFPRELEKQEVSYDLFNFSRGDESSQGRWAHGEAFDGRGEFRYIP    250
                     :||||||||.||||:|||||||||||:.|.:||||||.:.||:||||||.
BPUM_2346___y    201 VVVPTTFPRSLEKQQVSYDLFNFSRGEASKEGRWAHGRSMDGKGEFRYIS    250

BSNT_02114___    251 APIAFASAPHLKPAPMWLHNTVPPMSKC    278
                     ||:.|.|||.|||||..|.|| |...: 
BPUM_2346___y    251 APVVFGSAPKLKPAPKELFNT-PKKGE-    276


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