Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02114 and BPUM_2346
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence dna-align/BSNT_02114___yjqC.1.24716.seq
# -bsequence dna-align/BPUM_2346___yjqC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02114___yjqC-BPUM_2346___yjqC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02114___yjqC-BPUM_2346___yjqC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02114___yjqC
# 2: BPUM_2346___yjqC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 850
# Identity: 610/850 (71.8%)
# Similarity: 610/850 (71.8%)
# Gaps: 32/850 ( 3.8%)
# Score: 2088.5
#
#
#=======================================
BSNT_02114___ 1 ATGTTTTATCATATAAAAGAGCTTCAATATCAAGCAAAGCCAGCTC--AT 48
|||||||||||.||.|||||..|.||||||.|||||||||| ||| |.
BPUM_2346___y 1 ATGTTTTATCACATCAAAGAATTGCAATATGAAGCAAAGCC--CTCAAAG 48
BSNT_02114___ 49 CCCGATCCGGTTTATGCGAAAAAACTTCAAGAGGTGCTCGGCGGCCAATT 98
||.|||||..||||.|||||.||.||.|||||.||..|.|||||.||.|.
BPUM_2346___y 49 CCTGATCCACTTTACGCGAAGAAGCTGCAAGAAGTATTAGGCGGACAGTA 98
BSNT_02114___ 99 CGGTGAAATTAGCGTCATGATGCAGTATTTGTTTCAAGGGTTTAACTGCA 148
.||.||||||||.|||||||||||.|||||.||||||||.|||||.||..
BPUM_2346___y 99 TGGAGAAATTAGTGTCATGATGCAATATTTATTTCAAGGCTTTAATTGTC 148
BSNT_02114___ 149 GGGCGGATGCTAAGTATAAAGATTTGTTATATGATGTGGGGACCGAAGAG 198
|.||.|||...||.||.|.||||||.||.|.|||..|.|||||.||.||.
BPUM_2346___y 149 GAGCAGATCAAAAATACAGAGATTTATTGTTTGACATAGGGACAGAGGAA 198
BSNT_02114___ 199 ATCGGGCACGTAGAAATGCTGGCAACGATGATTTCCAGGCTT-CTGGACA 247
||.||.||.||.|||||||||||.||||||| ||.||.|.|| ||.||.|
BPUM_2346___y 199 ATTGGTCATGTGGAAATGCTGGCGACGATGA-TTGCACGTTTACTAGATA 247
BSNT_02114___ 248 ATGCACCCGCGGATGTACAGGAGGATGCTTATAAAAGCAATCCAGCTATC 297
|.|||||.|...|.|.||||||..|.||.||..||||..|||||||..|.
BPUM_2346___y 248 AAGCACCAGTTAAAGAACAGGAACAGGCGTACGAAAGTGATCCAGCACTT 297
BSNT_02114___ 298 GCAGCAGTCATGTCCGGGATGAATCCTCAGCACGCGATTGTGTCCGGATT 347
|||||.||.|||...||.||||||||||||||.||.|||||..||||.||
BPUM_2346___y 298 GCAGCTGTTATGGGTGGTATGAATCCTCAGCATGCAATTGTTGCCGGTTT 347
BSNT_02114___ 348 GGGGGCGATGGCATCAGATAGTGAGGGCTATCCGTGGAATGCAAAATACA 397
.||.||.||||||.|.|||||..|.||.||||||||||||||.||.||.|
BPUM_2346___y 348 AGGAGCCATGGCAGCGGATAGCCAAGGATATCCGTGGAATGCCAAGTATA 397
BSNT_02114___ 398 TTATCTCAAGCGGAAACCTGCTGGCCGATTTTCGCGCTAACTTAAATGCG 447
|.||..||||||||||..|..||||.||||||.|.||.||.||||||||.
BPUM_2346___y 398 TCATTGCAAGCGGAAATTTAATGGCTGATTTTAGAGCCAATTTAAATGCA 447
BSNT_02114___ 448 GAGGCCCAAGGACGCCTTCAGGTGACACGGCTTTATGCCATGACCGATGA 497
||..|.|||||..|.||||||||.||..||||.||||..|||||||||||
BPUM_2346___y 448 GAATCACAAGGGAGACTTCAGGTCACCAGGCTCTATGAAATGACCGATGA 497
BSNT_02114___ 498 TCCAGGGGTAAGAGATATGCTGTCATTTTTGATTGCAAGGGATACCTATC 547
||.|||.||.|.|||||||||.||.||..|.|||||..|.|||||.||||
BPUM_2346___y 498 TCGAGGCGTGAAAGATATGCTCTCTTTCCTTATTGCTCGTGATACATATC 547
BSNT_02114___ 548 ATCAAAATATGTGGTACGCGGCCATTAAAGAACTGGAGGAAAGAGAACGG 597
||||||||||||||...|||||.|||||||||.|.||.|||.||||..||
BPUM_2346___y 548 ATCAAAATATGTGGATTGCGGCGATTAAAGAATTAGAAGAACGAGAGGGG 597
BSNT_02114___ 598 GATATTGTCGTCCCGACGACGTTCCCGCG-TGAGCTCGAAAAGCAAGAAG 646
|||.|.|||||.||.||.||.|||||.|| |.| ||.|||||.||..|||
BPUM_2346___y 598 GATGTCGTCGTACCAACCACCTTCCCTCGCTCA-CTAGAAAAACAGCAAG 646
BSNT_02114___ 647 TCTCCTATGATTTGTTTAACTTTTCCAGGGGGGATGAAAGCTCGCAAGGA 696
|.|||||||||.|||||||.||.||.||.|||||.|.|||...|.||||.
BPUM_2346___y 647 TGTCCTATGATCTGTTTAATTTCTCAAGAGGGGAAGCAAGTAAGGAAGGC 696
BSNT_02114___ 697 AGATGGGCACATGG-GGAAGCCTTTGACGGCCGG----GGTGAATTCAGG 741
|||||||||||||| .||||| |.||..|| ||.||.||.||.
BPUM_2346___y 697 AGATGGGCACATGGCCGAAGC-----ATGGATGGAAAAGGGGAGTTTAGA 741
BSNT_02114___ 742 TATATCCCGGCTCCGATTGCGTTCGCATCTGCGCCTCATCTTAAACCGGC 791
|||||..|.||.||..|.|.|||.|..|||||.||..|.||.|||||.||
BPUM_2346___y 742 TATATTTCTGCACCCGTCGTGTTTGGTTCTGCACCAAAACTAAAACCCGC 791
BSNT_02114___ 792 GCCCATGTGGCTGCATAATACAGTTCCCCC----AATGTCGAAATGTTAG 837
.||.|.|...|||..|||.||| || ||.|.|||| |.|
BPUM_2346___y 792 ACCAAAGGAACTGTTTAACACA------CCGAAAAAAGGCGAA---TAA- 831
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