Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01385 and BPUM_2342

See DNA alignment / Visit BSNT_01385 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_01385___yfiL.1.24716.seq
#    -bsequence pep-align/BPUM_2342.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01385___yfiL-BPUM_2342.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01385___yfiL-BPUM_2342.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01385___yfiL
# 2: BPUM_2342
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity:      80/336 (23.8%)
# Similarity:   134/336 (39.9%)
# Gaps:          99/336 (29.5%)
# Score: 304.0
# 
#
#=======================================

BSNT_01385___      1 --------MLQAENIKKAYGKKTIVKGISFSLQKGESFGLLGPNGAGKST     42
                             |:.|.|:.|:||:..::|||.|::|:||...::||:|:||:|
BPUM_2342          1 MSKERDAFMISATNLHKSYGQTHVLKGIDFTVQEGEVVAIIGPSGSGKTT     50

BSNT_01385___     43 TISMISGLVPHDSGNITVGGYVI------GKETAKAKQKIGIVPQEIALY     86
                     .:..::.|...|.|.:|||...|      .|:..|.:|:..:|.|...|:
BPUM_2342         51 LLRSLNSLDIPDKGELTVGEATIQFERYHKKDLLKLRQQSSMVFQHYHLF    100

BSNT_01385___     87 PTLTAHENLMFWGKMYGLTHG----------EAKKRSAEVLEYVGLTERA    126
                     ....|.||         :|.|          ||:|...:.|..:||..: 
BPUM_2342        101 QNKRALEN---------ITEGLIVSQNMSKKEAEKVGEQFLTRIGLLHK-    140

BSNT_01385___    127 KDKIET-FSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETV    175
                     ||...: .|||.::||.|..||...|.:|:.||||..:||:....|||.:
BPUM_2342        141 KDAFPSELSGGQQQRIGIARALAMNPSVLLFDEPTSALDPEMVGEILEMI    190

BSNT_01385___    176 KKLNETGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGG    225
                     |.:...|||::..:|.:...:.:.|.:..:..||::..|:..|:..:...
BPUM_2342        191 KDIASQGMTMVIVTHEISFAKDVADTVIFMADGEIVEKGSPEDVLLKPQH    240

BSNT_01385___    226 DTIIQLTVSGIDEAFLLAIRSLAHVNDVTVQESELKIDISAAHHEKVVTS    275
                     :...|.               |:.::....||||...             
BPUM_2342        241 ERTKQF---------------LSRIHRGMWQESEKDK-------------    262

BSNT_01385___    276 LLAEAAAHHINLLSLQVQEPNLERLFLNLTGRTLRD    311
                                                         
BPUM_2342        262 ------------------------------------    262


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