Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00777 and BPUM_2341
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:32
# Commandline: needle
# -asequence pep-align/BSNT_00777___ydbM.1.24716.seq
# -bsequence pep-align/BPUM_2341___ydbM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00777___ydbM-BPUM_2341___ydbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00777___ydbM-BPUM_2341___ydbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00777___ydbM
# 2: BPUM_2341___ydbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 206/387 (53.2%)
# Similarity: 271/387 (70.0%)
# Gaps: 6/387 ( 1.6%)
# Score: 1114.0
#
#
#=======================================
BSNT_00777___ 1 --MSLFIQNDQQRQWMEKIGRIADEFQQTAAEDDEQGRFPAEKIQKLRDA 48
.:||:..|.|:.|:.::..:.:..:|||.|.||...||.:.|:.|.:.
BPUM_2341___y 1 MSKALFVDTDFQKTWLHQLESLRETIEQTAKEHDEGAYFPEKNIESLIEM 50
BSNT_00777___ 49 GYTALTLPASHGGGGISVYDMLLFQERLARGDAPTALSIGWHLSVIGELG 98
|||.|:|||.|||||.||.||:||||.|...|..|.||||||..|:||:.
BPUM_2341___y 51 GYTTLSLPAEHGGGGQSVKDMVLFQETLGSMDGATTLSIGWHQGVVGEIY 100
BSNT_00777___ 99 EGNSWDEDVFAFVAKEVQNGAVINRAATEAKTGSPTRGGRPGTHAVKKDG 148
|...|:|....|.|:||:.||::|||.:||:||||||||:|||.|.:...
BPUM_2341___y 101 EKKQWNEQQLQFFAEEVKKGALVNRAVSEAQTGSPTRGGKPGTTATRSGN 150
BSNT_00777___ 149 KWAVNGRKTFTTMSQALDYFLVTAWIEDKQTTGVFLIHKDDPGLSIEETW 198
:|.:||||.|||||.||.||||..|||:|:..|.||||::..|:||||||
BPUM_2341___y 151 EWIINGRKIFTTMSPALTYFLVGVWIEEKEAMGFFLIHRETAGVSIEETW 200
BSNT_00777___ 199 DMMAMRASGSHDLVLNEVMLDENKLVELLQGPRGAKPNGWLLHIPAIYLG 248
:::.||.:.||||:|::|.:.::.|||:.:||||...|.|:.|||:.|||
BPUM_2341___y 201 NVVGMRGTESHDLILDQVKVSDDMLVEVQKGPRGGTLNPWIAHIPSCYLG 250
BSNT_00777___ 249 VAQAARDYAVQFASEYSPNSLNGPIKNVPAVQQRTGEMELELLNARHFLF 298
:||||||||||:|..:||||:||.|.::|.||...||::|.|..|||.::
BPUM_2341___y 251 IAQAARDYAVQYAITHSPNSINGTISDLPNVQTLIGEIDLLLKQARHVIY 300
BSNT_00777___ 299 HIAQLYDDPERRPHLTSELGAAKHIVTNAALSVVDKAMRIVGAKSLERTN 348
....||:.||:|..|.:|.||.||.|.|.:|.|||||||:||||||....
BPUM_2341___y 301 STTTLYEKPEKRELLINEFGAVKHTVVNHSLQVVDKAMRLVGAKSLSLDC 350
BSNT_00777___ 349 PLQRYYRDVRAGLHNPPMDDAVIHKLAAEAFES---- 381
||||||||:|||||||||||..|.|:|.:|.:.
BPUM_2341___y 351 PLQRYYRDIRAGLHNPPMDDMTISKMAKQAIQEKKES 387
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