Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00370 and BPUM_2340

See DNA alignment / Visit BSNT_00370 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:16
# Commandline: needle
#    -asequence pep-align/BSNT_00370___ybxI.1.24716.seq
#    -bsequence pep-align/BPUM_2340.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00370___ybxI-BPUM_2340.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00370___ybxI-BPUM_2340.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00370___ybxI
# 2: BPUM_2340
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     151/304 (49.7%)
# Similarity:   207/304 (68.1%)
# Gaps:          23/304 ( 7.6%)
# Score: 781.0
# 
#
#=======================================

BSNT_00370___      1 MPFDYFLKEEQT-------KEREKVVN-QNEGENKMKKWIYVVLVLSIAG     42
                           :||::|       .:...::. ..:|...:|| .|:..:.|...
BPUM_2340          1 ------MKEKRTCVPYVPSLQHATIMEIMRKGAIVLKK-KYIKRLFSCIM     43

BSNT_00370___     43 IGGFSVHAASSAHEKHLNVSRMNVDDEFKDTDGTFILHDLQKEQTFVYNR     92
                     :..|.:...||...:.:   ..:||:.||:.:|||::.:::::..:|||:
BPUM_2340         44 LMAFCISQPSSTEARSI---AWSVDEFFKNREGTFVIQEVKEKSPWVYNK     90

BSNT_00370___     93 KRANQRQTPQSTFKVVNALIGLQVKAVRDEYDVKRWDGVKREFESWNRDH    142
                     |||.:|..|||||||.|||||||..|||||||:|.|||||||.::|||||
BPUM_2340         91 KRAKERFAPQSTFKVANALIGLQTGAVRDEYDIKYWDGVKREIDNWNRDH    140

BSNT_00370___    143 TLGSAMRESAIWYYQALARDIGEERMKSWLHTLSYGNEDISGGIDQFWLQ    192
                     ||||.||:|.:|||||:|||||||||..|:..:.|||:|||||||||||.
BPUM_2340        141 TLGSGMRDSVVWYYQAMARDIGEERMNHWVKAIHYGNKDISGGIDQFWLS    190

BSNT_00370___    193 SSLTISPLEQETFLEKLFKEELPFDKPVMKTVKRMMIQEEGDHYTLYGKT    242
                     |:|.|||:||..||::|::|.||||...|:||||||:|||..|.||||||
BPUM_2340        191 STLRISPIEQVRFLKQLYEETLPFDLKNMRTVKRMMVQEEEKHATLYGKT    240

BSNT_00370___    243 GTRLTDMGLGWFVGFIKTEHGSYVFVTNVDDSGTKAKNITVDILKKYGLI    292
                     |   :...:||:|||||.||.:|:..||:..:|.:||:||..|||||.|:
BPUM_2340        241 G---SGSDIGWYVGFIKHEHKTYILATNIKGTGIEAKDITYRILKKYHLM    287

BSNT_00370___    293 TS--    294
                     .:  
BPUM_2340        288 EASV    291


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