Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00616 and BPUM_2334

See DNA alignment / Visit BSNT_00616 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:24
# Commandline: needle
#    -asequence pep-align/BSNT_00616___hxlR.1.24716.seq
#    -bsequence pep-align/BPUM_2334___hxlR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00616___hxlR-BPUM_2334___hxlR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00616___hxlR-BPUM_2334___hxlR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00616___hxlR
# 2: BPUM_2334___hxlR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      89/123 (72.4%)
# Similarity:   102/123 (82.9%)
# Gaps:           8/123 ( 6.5%)
# Score: 469.0
# 
#
#=======================================

BSNT_00616___      1 ---MSRMDDKRFNCEKELTLAVIGGKWKMLILWHLGKEGTKRFNELKTLI     47
                        .|||::|.|||||||||.:||||||||||||||:||||||.|||:|:
BPUM_2334___h      1 MSLSSRMENKVFNCEKELTLNIIGGKWKMLILWHLGREGTKRFGELKSLM     50

BSNT_00616___     48 PDITQKILVNQLRELEQDMIVHREVYPVVPPKVEYSLTPHGESLMPILEA     97
                     |.|||::|||||||||:|.|||||||||||||||||||..||||||||||
BPUM_2334___h     51 PGITQRMLVNQLRELEEDHIVHREVYPVVPPKVEYSLTELGESLMPILEA    100

BSNT_00616___     98 MYEWGKGYMELIDIDKNVMKESL    120
                     ||:|||.|     :|.|.:|:..
BPUM_2334___h    101 MYDWGKQY-----LDSNFLKDDK    118


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