Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05850 and BPUM_2331
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence pep-align/BSNT_05850___ywbO.1.24716.seq
# -bsequence pep-align/BPUM_2331.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05850___ywbO-BPUM_2331.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05850___ywbO-BPUM_2331.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05850___ywbO
# 2: BPUM_2331
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 62/246 (25.2%)
# Similarity: 106/246 (43.1%)
# Gaps: 51/246 (20.7%)
# Score: 211.0
#
#
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BSNT_05850___ 1 MTVHIKVYSDYVCPFCFVGKAAFEEAI----KGKDVEVEWMPFELRPSPS 46
:.::::||..||||::||...|.|: :.:.||:|:..|||.|...
BPUM_2331 1 --MKVQIWSDIACPFCYIGKKQLETALEQFPQKEQVEIEFKSFELDPHAP 48
BSNT_05850___ 47 PQLD-PVNDP-SKQY-MWQTSIQPMAEKL-------GVEINF-PNVSPHP 85
..:| .|:|. .|:| |.::....|.|:: |::..| |.|..:.
BPUM_2331 49 ADVDFDVHDMLVKKYGMSRSQAMAMNEQMKQAGKEKGIDFQFDPLVLTNT 98
BSNT_05850___ 86 YTDLAFEGFHFAKEYNKGHEYNTRVFQAFFQEGQNIGDIDILTKLAEEVG 135
:. |.....:|.:..||......:|||:|.:|:::||...|..:||:.|
BPUM_2331 99 FD--AHRLAQYAGQMGKGDFVMGELFQAYFTDGKHVGDRQTLLDIAEKAG 146
BSNT_05850___ 136 LDGASFKSALETRTYQDVQRQALKHAYEEADITAVPTFIIGDTV-IPGAA 184
||....:..|....:.|..|:..:.| .:..|.|||.|:|.|.. :.||.
BPUM_2331 147 LDLQEVQQMLGGEEFADHVRKDEQEA-RQLGINAVPFFLINDKYSVAGAQ 195
BSNT_05850___ 185 GKDVFEKAISDEQKKK------------------------------ 200
..|.|.:|:.....::
BPUM_2331 196 PADTFLRALETAWTEEAAQAEKAAANSFEAACADGVCAVPTPKEEA 241
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