Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04200 and BPUM_2328
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence pep-align/BSNT_04200___araD.1.24716.seq
# -bsequence pep-align/BPUM_2328___araD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04200___araD-BPUM_2328___araD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04200___araD-BPUM_2328___araD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04200___araD
# 2: BPUM_2328___araD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity: 124/234 (53.0%)
# Similarity: 159/234 (67.9%)
# Gaps: 5/234 ( 2.1%)
# Score: 655.5
#
#
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BSNT_04200___ 1 MLETLKKEVLAANLKLQEHQLVTFTWGNVSGIDREKERIVIKPSGVEYSD 50
|||.||:||..|||.|.::.||.|||||||..||:....||||||:.|..
BPUM_2328___a 1 MLERLKEEVFEANLDLPKYGLVKFTWGNVSACDRDSGLFVIKPSGIAYDQ 50
BSNT_04200___ 51 LTADDLVVLNLDGEVVEGSLKPSSDTPTHVYLYKAFPNIGGIVHTHSQWA 100
|:|.|:||::.|||||||...|||||.||..|||.|..||||.|:||.||
BPUM_2328___a 51 LSAKDMVVVDFDGEVVEGEYSPSSDTATHAVLYKHFDEIGGISHSHSMWA 100
BSNT_04200___ 101 TSWAQSGRDIPPLGTTHADYFDSAIPCTREMYDEEIIHDYELNTGKVIAE 150
|.|||:|.|:..:||||||.|..|:||.|.:.:||:...||:.||::|.|
BPUM_2328___a 101 TVWAQAGLDLQAMGTTHADTFYGAVPCARFLTEEEVNRGYEVETGRLIIE 150
BSNT_04200___ 151 TFQHHNYE--QVPGVLVNNHGPFCWGTDALNAIHNAVVLETVAEMAYHSI 198
||:..|.: .|||||:..||||.||.||.:|:.|:|:||.||:|...:.
BPUM_2328___a 151 TFEKRNLDVMAVPGVLLQGHGPFTWGKDAKSAVTNSVILEEVAKMNLFAK 200
BSNT_04200___ 199 MLNKDVTPINTVLHEKHFYRKHGANAYYGQS--- 229
.||:...|:...:.:||:.||||.:|||||.
BPUM_2328___a 201 QLNEYAEPLPQRILDKHYLRKHGEHAYYGQKPST 234
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