Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03822 and BPUM_2306

See DNA alignment / Visit BSNT_03822 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence pep-align/BSNT_03822___yqeF.1.24716.seq
#    -bsequence pep-align/BPUM_2306___yqeF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03822___yqeF-BPUM_2306___yqeF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03822___yqeF-BPUM_2306___yqeF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03822___yqeF
# 2: BPUM_2306___yqeF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     151/244 (61.9%)
# Similarity:   194/244 (79.5%)
# Gaps:           3/244 ( 1.2%)
# Score: 846.0
# 
#
#=======================================

BSNT_03822___      1 MKHFIILFLLLFVTAGCEGRGYEDVVAFGDSNTRGSNWDYRDYPKAQQWV     50
                     ||.:::||:|:.|.|||.....|.|:|||||||:|||||:||||.:::||
BPUM_2306___y      1 MKKYVVLFILICVAAGCSKPDQESVIAFGDSNTKGSNWDFRDYPTSEKWV     50

BSNT_03822___     51 NILKTAERGNLDILNAGIGGQTTEDARLRFQTDVLDQKPKYLFIMFGTND    100
                     |::|..|||.:.:.||||||||||||:|||:.|:|.|||.|:.|||||||
BPUM_2306___y     51 NLMKNVERGQIQVKNAGIGGQTTEDAKLRFEQDILKQKPAYVLIMFGTND    100

BSNT_03822___    101 AAILTEGKPRVSKQRFRENLVYFIEESRKHGIKPILMTCIPIIEGNGKHH    150
                     ||||....|||:|:||:||:.|||.||||.||.||||||:|::|| ||..
BPUM_2306___y    101 AAILDGKHPRVTKKRFKENITYFISESRKAGITPILMTCVPVVEG-GKKG    149

BSNT_03822___    151 LFYYSRYQAAAFEPKGGARKWHNSYNDITRDVSKRLDVPLVDNWKHFIEA    200
                     |:|||||:::.|..:||||.|.||||||||:::|...||||||||.||. 
BPUM_2306___y    150 LYYYSRYKSSYFAERGGARAWQNSYNDITREIAKDQQVPLVDNWKAFIR-    198

BSNT_03822___    201 DGGKATDEALIQSGLIDPSGNHMTPKGARIVYEGIQDGQILQR-    243
                     :.|:.:|.||||||||||||||||||||||:|..|::..:::. 
BPUM_2306___y    199 EAGEDSDNALIQSGLIDPSGNHMTPKGARIIYNEIKERDVIKHF    242


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