Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03820 and BPUM_2302
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence pep-align/BSNT_03820___yqeG.1.24716.seq
# -bsequence pep-align/BPUM_2302___yqeG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03820___yqeG-BPUM_2302___yqeG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03820___yqeG-BPUM_2302___yqeG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03820___yqeG
# 2: BPUM_2302___yqeG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity: 95/173 (54.9%)
# Similarity: 110/173 (63.6%)
# Gaps: 58/173 (33.5%)
# Score: 513.0
#
#
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BSNT_03820___ 1 MLKKFFLPDEFVKNIFHITPEKLKERNVKGIITDLDNTLVEWDRPNATPR 50
BPUM_2302___y 0 -------------------------------------------------- 0
BSNT_03820___ 51 LIEWFEEMKEHGIKVTIVSNNNERRVKLFSEPLGIPFIYKARKPMGKAFN 100
||:|||:|||||||||:||||||||:.|||||||:||||:|||
BPUM_2302___y 1 -------MKDHGIQVTIVSNNNEKRVKLFSEPVHIPFIYKAKKPMGRAFN 43
BSNT_03820___ 101 RAVRNMELKKEDCVVIGDQLLTDVLGGNRNGYHTILVVPVASSDGFITRF 150
:||.:|:|||||.|||||||:||||||||:|:|||||||||:||||.|:|
BPUM_2302___y 44 KAVSDMQLKKEDVVVIGDQLMTDVLGGNRHGFHTILVVPVAASDGFFTKF 93
BSNT_03820___ 151 NRQVERRILSALKRKGHIQWEE- 172
|||:|||||.||||||||||||
BPUM_2302___y 94 NRQIERRILGALKRKGHIQWEEE 116
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