Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03818 and BPUM_2300

See DNA alignment / Visit BSNT_03818 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:22
# Commandline: needle
#    -asequence pep-align/BSNT_03818___aroD.1.24716.seq
#    -bsequence pep-align/BPUM_2300___aroE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03818___aroD-BPUM_2300___aroE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03818___aroD-BPUM_2300___aroE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03818___aroD
# 2: BPUM_2300___aroE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     184/280 (65.7%)
# Similarity:   228/280 (81.4%)
# Gaps:           0/280 ( 0.0%)
# Score: 984.0
# 
#
#=======================================

BSNT_03818___      1 MKKLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKG     50
                     ||.||||||||:|||||||||||:|||.|:|||||.|:||.|||:||:.|
BPUM_2300___a      1 MKPLYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAING     50

BSNT_03818___     51 IRALGVQGINVTVPHKVSIMDYLDHIDESAKVIGAVNTVRREGDKLVGYN    100
                     ::|||:.|.||||||||.||.|||.||.:|:.:.||||||.|..:|||||
BPUM_2300___a     51 MKALGISGFNVTVPHKVDIMQYLDKIDVTAERLRAVNTVRLEEGQLVGYN    100

BSNT_03818___    101 TDGEGFVKSLMKVLDKPISELSFLMIGAGGAARAIFTTIVRNTPKKFDIC    150
                     ||||||:.||::.||:|::|||||:||||||||||:|||....||.|||.
BPUM_2300___a    101 TDGEGFLHSLLEALDQPLTELSFLLIGAGGAARAIYTTIADYAPKSFDIT    150

BSNT_03818___    151 NRTLEKAKRLTEATPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNV    200
                     |||:|||:.|.::.........:::|.|||:|.:|||||||||:||:|||
BPUM_2300___a    151 NRTIEKAEALIKSADGNITSSAITLKTAEEQLGEYDVIIHTTSIGMHPNV    200

BSNT_03818___    201 DDVPLSLQRAASSAVVCDIVYNPIQTALLKEASQKGLKTLDGVGMFVEQA    250
                     ::.|:||..|..:|||||||||||:|.||:||:..||||:|||||||.||
BPUM_2300___a    201 EETPISLANAKKTAVVCDIVYNPIETKLLREAAGLGLKTVDGVGMFVGQA    250

BSNT_03818___    251 ALSFQLWTGQEPDIEKMRSIVIGKLGGTEC    280
                     |.:|:||||..||:.||:||||.|||||.|
BPUM_2300___a    251 ARAFELWTGITPDVRKMKSIVIQKLGGTPC    280


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