Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03812 and BPUM_2294

See DNA alignment / Visit BSNT_03812 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:22
# Commandline: needle
#    -asequence pep-align/BSNT_03812___comER.1.24716.seq
#    -bsequence pep-align/BPUM_2294___comER.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03812___comER-BPUM_2294___comER.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03812___comER-BPUM_2294___comER.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03812___comER
# 2: BPUM_2294___comER
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     167/282 (59.2%)
# Similarity:   213/282 (75.5%)
# Gaps:           9/282 ( 3.2%)
# Score: 885.0
# 
#
#=======================================

BSNT_03812___      1 MKIGFIGTGNMGTILIESFIESKAADPSNMTITNRTIEKALHIKNRYNSI     50
                     |.||.||||||||||.|:||||||.:||::||||||||||.:||..:..:
BPUM_2294___c      1 MNIGIIGTGNMGTILTEAFIESKAVNPSSITITNRTIEKAFNIKKNHPEL     50

BSNT_03812___     51 NVTESLEKLVSENEMIFICVKPLDIYPLLARALPYLRKDHILISITSPVQ    100
                     .||:.|...||..:.||:|||||||||||....|.|.:...::.|||||.
BPUM_2294___c     51 EVTKQLTGAVSNKDFIFVCVKPLDIYPLLKELSPLLTEHQTIVIITSPVH    100

BSNT_03812___    101 TEQLEQYVPCQVARVIPSITNRALAGVSLVTFGTSCGESAKTKINELMQH    150
                     .||::..||||.||:|||||||||:|.||:|||:||..:.||.:.:|...
BPUM_2294___c    101 PEQIQDIVPCQTARLIPSITNRALSGASLLTFGSSCSVATKTALRQLASC    150

BSNT_03812___    151 ISHPLQIESDITRVASDIVSCGPAFMSYLIQRFIDAAVSETSVSKQDAIL    200
                     ||.|::|...|||.|||||||||||:|:|:|:.|:|||.||.:||::|..
BPUM_2294___c    151 ISTPIEIHHSITRAASDIVSCGPAFISFLVQKMIEAAVEETDISKEEATT    200

BSNT_03812___    201 MCKEMLVGMGKLLETELYTLPALQEKVCVKGGVTGEGIKALESGVQDMFH    250
                     :.::||||:|:|:|..|||||.||:|||||||||||||||||:|||||||
BPUM_2294___c    201 LSEDMLVGLGRLIEKRLYTLPTLQDKVCVKGGVTGEGIKALEAGVQDMFH    250

BSNT_03812___    251 RVFQNTHMKYEEDISAVKKQFHV---------    273
                     |:|||||.|::||:.||.:|:..         
BPUM_2294___c    251 RLFQNTHEKFDEDLEAVAQQYPPSVFTDDRRN    282


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