Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03811 and BPUM_2293
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence pep-align/BSNT_03811___comEA.1.24716.seq
# -bsequence pep-align/BPUM_2293___comEA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03811___comEA-BPUM_2293___comEA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03811___comEA-BPUM_2293___comEA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03811___comEA
# 2: BPUM_2293___comEA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 83/217 (38.2%)
# Similarity: 121/217 (55.8%)
# Gaps: 20/217 ( 9.2%)
# Score: 366.5
#
#
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BSNT_03811___ 1 MNWLNQHKKAII------LAASAAVFTAIMI--FLATGKNK----EPVKQ 38
.|.:| |...|.:.:||:| ||..| || ||...
BPUM_2293___c 1 -------MKRLIPLRKYSLYIGAGLISAIIITFFLLAG-NKGSTGEPSVL 42
BSNT_03811___ 39 AVPTETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRTGDRVSQAI 88
....:...|:..:....|..:.:|.:::||||:.||||..::..||.:||
BPUM_2293___c 43 KGDQDKHVTLEDKTEKPDNDSSSIFVEVKGAVKKPGVYTFQSDARVEEAI 92
BSNT_03811___ 89 EKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEEIAVQQGGGGSVQSDG 138
.:|||.:.:||..::|.|..|:|..::|:.|:||.....|..|....|..
BPUM_2293___c 93 RRAGGFTSKADTIEINQAAKLEDSMMIYVRKQGEAERQTQTAGADAPSGN 142
BSNT_03811___ 139 GKGALVNINTATLEELQGISGVGPSKAEAIIAYREENGRFQTIEDITKVS 188
.|...||:|.|...|||.|:|:||:||||||.||||:|.||.|||:..:|
BPUM_2293___c 143 EKSQSVNVNQADAAELQTINGIGPAKAEAIITYREEHGEFQQIEDLRNIS 192
BSNT_03811___ 189 GIGEKSFEKIKSSITVK 205
|.|||:.|::|:.:|||
BPUM_2293___c 193 GFGEKTIERLKNELTVK 209
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