Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03804 and BPUM_2289
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence pep-align/BSNT_03804___holA.1.24716.seq
# -bsequence pep-align/BPUM_2289___holA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03804___holA-BPUM_2289___holA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03804___holA-BPUM_2289___holA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03804___holA
# 2: BPUM_2289___holA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 260/347 (74.9%)
# Similarity: 305/347 (87.9%)
# Gaps: 8/347 ( 2.3%)
# Score: 1368.0
#
#
#=======================================
BSNT_03804___ 1 MVFDVWKSLKKGDVHPVYCLYGKETYLLQETVSRIRQTVVDQETKDFNLS 50
|||:||.:||:||:|||||||||||||||||.:::||.|||:||||||.|
BPUM_2289___h 1 MVFEVWNNLKRGDIHPVYCLYGKETYLLQETAAKLRQAVVDEETKDFNYS 50
BSNT_03804___ 51 VFDLEEDPLDQAIADAETFPFMGERRLVIVKNPYFLTGEKKKEKIEHNVS 100
|||:||.||:||:.||||||||||||||::|||||||.|||||||||.:|
BPUM_2289___h 51 VFDMEEVPLEQAVIDAETFPFMGERRLVVIKNPYFLTAEKKKEKIEHELS 100
BSNT_03804___ 101 ALESYIQSPAPYTVFVLLAPYEKLDERKKLTKALKKHAFMMEAKELNAKE 150
.||:|::.|||||:.||||||||||||||:||.|||.|.|:||||||.||
BPUM_2289___h 101 LLEAYLEKPAPYTILVLLAPYEKLDERKKITKLLKKKAAMVEAKELNPKE 150
BSNT_03804___ 151 TTDFTVNLAKTEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDRE 200
|||||:.|.|||.|:|.:||||.||:|..|.|||:|||::||.|:||:||
BPUM_2289___h 151 TTDFTITLVKTEGKSIFSEAAEQLVMLCGGSLSSLFQEVRKLSTYIGERE 200
BSNT_03804___ 201 EITLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFYDLLKQNEEPIK 250
||.|.||..|||||||||||||||:||||:|::::|:|||||||||||||
BPUM_2289___h 201 EIELADVNQLVARSLEQNIFELINQIVNRRRSQAMQMFYDLLKQNEEPIK 250
BSNT_03804___ 251 IMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFS 300
|:||||.||||||||||||:||||||||||||||||||||||||||||||
BPUM_2289___h 251 ILALISTQFRLILQTKYFAQQGYGQKQIASNLKVHPFRVKLAMDQARLFS 300
BSNT_03804___ 301 EEELRLIIEQLAVMDYEMKTGKKDKQLLLELFLLQLLKRNEKNDPHY 347
||||:.|:::|:.:|||||||||||||||||.||:||..
BPUM_2289___h 301 EEELKQIVKELSTIDYEMKTGKKDKQLLLELILLRLLGA-------- 339
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