Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03802 and BPUM_2288

See DNA alignment / Visit BSNT_03802 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence pep-align/BSNT_03802___rpsT.1.24716.seq
#    -bsequence pep-align/BPUM_2288___rpsT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03802___rpsT-BPUM_2288___rpsT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03802___rpsT-BPUM_2288___rpsT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03802___rpsT
# 2: BPUM_2288___rpsT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 88
# Identity:      77/88 (87.5%)
# Similarity:    82/88 (93.2%)
# Gaps:           0/88 ( 0.0%)
# Score: 380.0
# 
#
#=======================================

BSNT_03802___      1 MPNIKSAIKRTKTNNERRVHNATIKSAMRTAIKQVEASVANNEADKAKTA     50
                     ||||||||||||||||||.||.||||||||||||||.|||||:|::||.|
BPUM_2288___r      1 MPNIKSAIKRTKTNNERRAHNVTIKSAMRTAIKQVEVSVANNDAEQAKAA     50

BSNT_03802___     51 LTEAAKRIDKAVKTGLVHKNTAARYKSRLAKKVNGLSA     88
                     |:.|||||||||||||||||.||||||||||:||||||
BPUM_2288___r     51 LSSAAKRIDKAVKTGLVHKNAAARYKSRLAKQVNGLSA     88


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