Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03795 and BPUM_2282
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence pep-align/BSNT_03795___hrcA.1.24716.seq
# -bsequence pep-align/BPUM_2282___hrcA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03795___hrcA-BPUM_2282___hrcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03795___hrcA-BPUM_2282___hrcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03795___hrcA
# 2: BPUM_2282___hrcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity: 259/343 (75.5%)
# Similarity: 306/343 (89.2%)
# Gaps: 0/343 ( 0.0%)
# Score: 1336.0
#
#
#=======================================
BSNT_03795___ 1 MLTNRQLLILQVIINDFIKSAQPVGSRTLSKKDEITFSSATIRNEMADLE 50
||||||||||||||||||:|||||||||||||::||||||||||||||||
BPUM_2282___h 1 MLTNRQLLILQVIINDFIRSAQPVGSRTLSKKEDITFSSATIRNEMADLE 50
BSNT_03795___ 51 ELGFIEKTHSSSGRVPSEKGYRYYVDHLLSPVKLTKSDLDQIHSIFKEKI 100
||||||||||||||:||||||||||||||||.||:.::|..|.|.|:|||
BPUM_2282___h 51 ELGFIEKTHSSSGRIPSEKGYRYYVDHLLSPRKLSSNELVLIQSAFQEKI 100
BSNT_03795___ 101 FELEKTVQKSAQILSDLTNYTSIVLGPKLSENYLKQIQIIPIQPDMAVAI 150
|||||||||||:||||||||||||||||||||.|||||::|:||:.||||
BPUM_2282___h 101 FELEKTVQKSAEILSDLTNYTSIVLGPKLSENRLKQIQLVPVQPNKAVAI 150
BSNT_03795___ 151 LVTNTGHVENKTINFPTKMDLSDIEKLVNILNDRLSGVPMDELNERIFKE 200
::|::||||||||.|...:|:||||||:||||.||:|||||:|.:|::||
BPUM_2282___h 151 MITDSGHVENKTITFSEHLDVSDIEKLMNILNSRLAGVPMDQLKDRMYKE 200
BSNT_03795___ 201 VVMYLRQHIKNYDNILDALRSTFHSTNHIEKLFFGGKINMLNQPEFHDIT 250
|||.||.|:|:||:|||||.:||.||.:..|||||||||||||||||||.
BPUM_2282___h 201 VVMLLRTHLKDYDHILDALGNTFTSTQNESKLFFGGKINMLNQPEFHDID 250
BSNT_03795___ 251 RVRSLLSLIEKEQDVLKLVQSPRTGISIKIGKENDYEEMENCSLITASYS 300
|:|||:.|||::.||::|....:.||:||||.||:.|.|||||||||:||
BPUM_2282___h 251 RIRSLMMLIEQKNDVMQLFHPNQQGITIKIGSENNLEAMENCSLITATYS 300
BSNT_03795___ 301 VDQKQIGSIAIIGPTRMNYSRVVSLLQHVTSDLSKALTSLYDE 343
:|||.:||||:||||||:|.||||||.||:.|||.||::||||
BPUM_2282___h 301 IDQKSLGSIAVIGPTRMDYGRVVSLLHHVSKDLSNALSNLYDE 343
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