Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03789 and BPUM_2278

See DNA alignment / Visit BSNT_03789 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence pep-align/BSNT_03789___prmA.1.24716.seq
#    -bsequence pep-align/BPUM_2278___prmA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03789___prmA-BPUM_2278___prmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03789___prmA-BPUM_2278___prmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03789___prmA
# 2: BPUM_2278___prmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity:     259/311 (83.3%)
# Similarity:   287/311 (92.3%)
# Gaps:           0/311 ( 0.0%)
# Score: 1354.0
# 
#
#=======================================

BSNT_03789___      1 MKWSELSIHTTHEAVEPISNILHEAGASGVVIEDPLDLIKERENVYGEIY     50
                     |||||:|:|||:||||||:|||||||||||||||||||:|||||||||||
BPUM_2278___p      1 MKWSEISVHTTNEAVEPITNILHEAGASGVVIEDPLDLVKERENVYGEIY     50

BSNT_03789___     51 QLDPNDYPDEGVIVKAYLPVNSFLGETVDGIKETINNLLLYNIDLGRNHI    100
                     ||||||||:||||||||||:||||.||||.|||.|||||||:||||||.:
BPUM_2278___p     51 QLDPNDYPEEGVIVKAYLPMNSFLMETVDEIKEAINNLLLYDIDLGRNTL    100

BSNT_03789___    101 TISEVNEEEWATAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDP    150
                     :|.|||||||||||||||||||||||||||||||||||||:|||||||||
BPUM_2278___p    101 SICEVNEEEWATAWKKYYHPVKISEKFTIVPTWEEYTPVHSDELIIEMDP    150

BSNT_03789___    151 GMAFGTGTHPTTVLCIQALERFVQKGDKVIDVGTGSGILSIAAAMLKAES    200
                     |||||||||||||||||||||:|::.|.||||||||||||:||||:.|:.
BPUM_2278___p    151 GMAFGTGTHPTTVLCIQALERYVKENDTVIDVGTGSGILSVAAAMVGAKD    200

BSNT_03789___    201 VHAYDLDPVAVESARLNLKLNKVSDIAQVKQNNLLDGIEGEHDVIVANIL    250
                     :.|:|||.||||||:.|::||.||:...||||||||||.|||||||||||
BPUM_2278___p    201 IQAFDLDTVAVESAKQNIELNGVSEQVTVKQNNLLDGISGEHDVIVANIL    250

BSNT_03789___    251 AEVILRFTSQAYSLLKEGGHFITSGIIGHKKQEVKEALEQAGFTIVEILS    300
                     ||||||||.|||.|||:.|:||||||||.||.:||.|||:|||.|||:||
BPUM_2278___p    251 AEVILRFTDQAYDLLKKDGYFITSGIIGQKKLQVKTALEEAGFDIVEVLS    300

BSNT_03789___    301 MEDWVSIIAKK    311
                     |||||||||||
BPUM_2278___p    301 MEDWVSIIAKK    311


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