Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03781 and BPUM_2270

See DNA alignment / Visit BSNT_03781 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence pep-align/BSNT_03781___yqfB.1.24716.seq
#    -bsequence pep-align/BPUM_2270___yqfB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03781___yqfB-BPUM_2270___yqfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03781___yqfB-BPUM_2270___yqfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03781___yqfB
# 2: BPUM_2270___yqfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:      65/161 (40.4%)
# Similarity:    85/161 (52.8%)
# Gaps:          26/161 (16.1%)
# Score: 280.5
# 
#
#=======================================

BSNT_03781___      1 MEDLLTNPLIIAAIIGIISAIFGKKSK-EEKQNSQKRKKPQHVQSASSQK     49
                     |:.|..|||:||.|||||||:|||..| |||:...::.||........||
BPUM_2270___y      1 MDILFENPLLIAIIIGIISAVFGKIGKQEEKEQDNRQHKPAPQNKPMPQK     50

BSNT_03781___     50 KQS--------------------KEDAPAPIPNRMEQARREAEERRRETA     79
                     |..                    |:.....:.:|......|.|||:.|..
BPUM_2270___y     51 KAENPVSTDQLDDFGDVHDHGGMKKQGSQSLQDRYTATLAEMEERKSELN    100

BSNT_03781___     80 RNLKGLERDLAAAKQKTVYTKQKMLQ-VNKDTVVQGIVLGEVFGPPRAKK    128
                     :..|.|||:|...|..:...|.||:: :|:||||||::||||||.|||||
BPUM_2270___y    101 KEFKSLERELTRPKAASAGMKPKMIEKLNQDTVVQGMILGEVFGEPRAKK    150

BSNT_03781___    129 PHRTMRSARKN    139
                     |||||:.    
BPUM_2270___y    151 PHRTMKR----    157


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