Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03779 and BPUM_2268

See DNA alignment / Visit BSNT_03779 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence pep-align/BSNT_03779___yqfC.1.24716.seq
#    -bsequence pep-align/BPUM_2268___yqfC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03779___yqfC-BPUM_2268___yqfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03779___yqfC-BPUM_2268___yqfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03779___yqfC
# 2: BPUM_2268___yqfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 93
# Identity:      81/93 (87.1%)
# Similarity:    88/93 (94.6%)
# Gaps:           0/93 ( 0.0%)
# Score: 425.0
# 
#
#=======================================

BSNT_03779___      1 MGQRKNRMKAWLTRALEIPPDVMMDLPRITMVGRLHIYIENHRGLLLFSE     50
                     ||:||||:||||||.|||||||||||||||||||||||||||:||||||:
BPUM_2268___y      1 MGKRKNRLKAWLTRTLEIPPDVMMDLPRITMVGRLHIYIENHKGLLLFSD     50

BSNT_03779___     51 NEVRLMLKQGQCIISGKNFVIKAILPEEILLEGTIDVVRYVES     93
                     .||||||||||||||||:||||.||||||||||.||.|||::|
BPUM_2268___y     51 QEVRLMLKQGQCIISGKDFVIKTILPEEILLEGKIDEVRYIDS     93


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.