Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03779 and BPUM_2268
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:19
# Commandline: needle
# -asequence dna-align/BSNT_03779___yqfC.1.24716.seq
# -bsequence dna-align/BPUM_2268___yqfC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03779___yqfC-BPUM_2268___yqfC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03779___yqfC-BPUM_2268___yqfC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03779___yqfC
# 2: BPUM_2268___yqfC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity: 224/283 (79.2%)
# Similarity: 224/283 (79.2%)
# Gaps: 2/283 ( 0.7%)
# Score: 872.0
#
#
#=======================================
BSNT_03779___ 1 ATGGGGCAAAGAAAGAATCGTATGAAAGCTTGGCTGACAAGAGCATTGGA 50
|||||..|||||||.|||||..|.|||||.||||||||||||.||.|.||
BPUM_2268___y 1 ATGGGAAAAAGAAAAAATCGACTTAAAGCATGGCTGACAAGAACACTTGA 50
BSNT_03779___ 51 AATTCCCCCGGACGTTATGATGGATCTGCCGAGGATTACAATGGTTGGCA 100
|||.||.||.|||||.|||||||||||.||..|.|||||.||||||||||
BPUM_2268___y 51 AATCCCTCCAGACGTCATGATGGATCTTCCCCGTATTACGATGGTTGGCA 100
BSNT_03779___ 101 GACTTCATATCTACATAGAAAACCACAGAGGCCTTTTGCTTTTCAGTGAG 150
||||.|||||.||||||||.|||||.|.|||.|||||||||||||||||.
BPUM_2268___y 101 GACTCCATATTTACATAGAGAACCATAAAGGGCTTTTGCTTTTCAGTGAT 150
BSNT_03779___ 151 AATGAAGTGAGGCTGATGCTGAAGCAGGGCCAGTGCATCATATCTGGTAA 200
.|.|||||.|||||||||||.|||||.||.||.|||||.||.|||||.||
BPUM_2268___y 151 CAAGAAGTAAGGCTGATGCTTAAGCAAGGACAATGCATTATTTCTGGGAA 200
BSNT_03779___ 201 AAATTTTGTCATCAAGGCGATTCTTCCGGAAGAGATACTT-TTGGAGGGT 249
|.|||||||.||.||..|||||.|.||.|||||||| ||| ||.||.||.
BPUM_2268___y 201 AGATTTTGTGATTAAAACGATTTTGCCAGAAGAGAT-CTTATTAGAAGGG 249
BSNT_03779___ 250 ACGATTGATGTCGTTCGATATGTTGAGTCATAA 282
|..||.||||..||.||.|||.||||.||.|||
BPUM_2268___y 250 AAAATCGATGAGGTCCGTTATATTGATTCTTAA 282
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