Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03777 and BPUM_2266

See DNA alignment / Visit BSNT_03777 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence pep-align/BSNT_03777___phoH.1.24716.seq
#    -bsequence pep-align/BPUM_2266___phoH2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03777___phoH-BPUM_2266___phoH2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03777___phoH-BPUM_2266___phoH2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03777___phoH
# 2: BPUM_2266___phoH2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     262/319 (82.1%)
# Similarity:   297/319 (93.1%)
# Gaps:           0/319 ( 0.0%)
# Score: 1358.0
# 
#
#=======================================

BSNT_03777___      1 MTEHLLAMNQKLKNPDEALSLFGNQDSFLKLMEKDLNVNIITRGETIYVS     50
                     ||||||.:.|||.:|:||::||||||::|||||.:|||:||||||.:|||
BPUM_2266___p      1 MTEHLLEIQQKLDSPNEAIALFGNQDAYLKLMENELNVSIITRGEKVYVS     50

BSNT_03777___     51 GDDESFQIADRLLGSLLALIRKGIEISERDVIYAIKMAKKNELEYFESMY    100
                     |.:.|.:.|.||:.|||.|||||||||||||:||||||:|::|.|||:||
BPUM_2266___p     51 GQEASRETASRLMTSLLHLIRKGIEISERDVVYAIKMAQKDKLNYFENMY    100

BSNT_03777___    101 EEEITKNAKGKSIRVKTMGQREYVAAMKRNDLVFGIGPAGTGKTYLAVVK    150
                     |:|||||||||||||||:|||||.||||::|||||||||||||||||||.
BPUM_2266___p    101 EDEITKNAKGKSIRVKTIGQREYAAAMKKDDLVFGIGPAGTGKTYLAVVN    150

BSNT_03777___    151 AVHALKNGHIKKIILTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDALHD    200
                     |||||||||:|:||||||||||||||||||||||||||||||||||||||
BPUM_2266___p    151 AVHALKNGHVKRIILTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDALHD    200

BSNT_03777___    201 VLGADHTERLMERGIIEIAPLAYMRGRTLDDAYVILDEAQNTTPAQMKMF    250
                     |||:||||||:|||:|||||||||||||||||:|||||||||||||||||
BPUM_2266___p    201 VLGSDHTERLIERGVIEIAPLAYMRGRTLDDAFVILDEAQNTTPAQMKMF    250

BSNT_03777___    251 LTRLGFGSKMIITGDVSQIDLPKGVKSGLAVAKEMLKGIDGISMIELDQT    300
                     ||||||||||:||||::|||||||::||||.||:||..|.|||.||||||
BPUM_2266___p    251 LTRLGFGSKMVITGDITQIDLPKGMQSGLAAAKDMLAEIKGISFIELDQT    300

BSNT_03777___    301 DVVRHPLVAKIIEAYDKQN    319
                     ||||||||||||.||:||.
BPUM_2266___p    301 DVVRHPLVAKIIGAYEKQK    319


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.