Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03771 and BPUM_2262
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence pep-align/BSNT_03771___era.1.24716.seq
# -bsequence pep-align/BPUM_2262___era.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03771___era-BPUM_2262___era.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03771___era-BPUM_2262___era.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03771___era
# 2: BPUM_2262___era
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity: 270/301 (89.7%)
# Similarity: 288/301 (95.7%)
# Gaps: 0/301 ( 0.0%)
# Score: 1406.0
#
#
#=======================================
BSNT_03771___ 1 MTNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGV 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2262___e 1 MTNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGV 50
BSNT_03771___ 51 LTTGTSQTIFIDTPGIHKPKHKLGDFMMKVAQNTLKEVDLILFMINAEEG 100
|||.:||||||||||||||||||||||||||||||||||||||||||:||
BPUM_2262___e 51 LTTNSSQTIFIDTPGIHKPKHKLGDFMMKVAQNTLKEVDLILFMINAKEG 100
BSNT_03771___ 101 YGKGDEFIIEKLQTMSTPVFLIVNKIDKIHPDQLLLLIDEYRKRYPFKEI 150
||||||||||:|:..||||||:|||||:||||:|.|||||||.|||||||
BPUM_2262___e 101 YGKGDEFIIERLKQTSTPVFLVVNKIDQIHPDELFLLIDEYRTRYPFKEI 150
BSNT_03771___ 151 VPISALEGNNIETLLAQIEAYLPEGPQFYPSDQVTDHPERFIISELIREK 200
|||||||||||:|||.|:|.||||||||||:|||||||||||||||||||
BPUM_2262___e 151 VPISALEGNNIDTLLQQVEGYLPEGPQFYPADQVTDHPERFIISELIREK 200
BSNT_03771___ 201 VLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVERDSQKGIVIGKKG 250
|||||||||||||||||||||..:||.:||||||||||||||||||||:|
BPUM_2262___e 201 VLHLTREEIPHSIAVAIESIKPDENGKIHVAATIVVERDSQKGIVIGKRG 250
BSNT_03771___ 251 SLLKEVGKRARADIEALLGSRVYLELWVKVQKDWRNKMSQLRDFGFKEDE 300
|||||||::||.||||||||:||||||||||||||||.:.||||||:|||
BPUM_2262___e 251 SLLKEVGQKARRDIEALLGSKVYLELWVKVQKDWRNKSTHLRDFGFREDE 300
BSNT_03771___ 301 Y 301
|
BPUM_2262___e 301 Y 301
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