Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03769 and BPUM_2260

See DNA alignment / Visit BSNT_03769 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence pep-align/BSNT_03769___recO.1.24716.seq
#    -bsequence pep-align/BPUM_2260___recO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03769___recO-BPUM_2260___recO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03769___recO-BPUM_2260___recO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03769___recO
# 2: BPUM_2260___recO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     194/256 (75.8%)
# Similarity:   225/256 (87.9%)
# Gaps:           1/256 ( 0.4%)
# Score: 1036.0
# 
#
#=======================================

BSNT_03769___      1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVS     50
                     ||.|.|||||||.||||||||||||||||||||||||||||.||||||:|
BPUM_2260___r      1 MLIKSEGIVLRTTDYGETNKIVTLLTREHGKIGVMARGAKKSNSRLSAIS     50

BSNT_03769___     51 QPFLYGSFLMQKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYIAELVDR    100
                     ||||||:||:|.::|||||||||||.|||.|||||||||||||:.||:|:
BPUM_2260___r     51 QPFLYGTFLIQSSTGLGTLQQGEMIESMRTIREDLFLTAYAAYMTELLDK    100

BSNT_03769___    101 GTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELN    150
                     |||||||||||||.:|:||:.||||||.|:|.|||::|||.|||:.|||:
BPUM_2260___r    101 GTEEKKPNPYLFELLLQSLRHLNEGTDADIILFIVEVKMLSVMGMKPELD    150

BSNT_03769___    151 HCVHCKSQDGTFHFSVRDNGFICHRCFEKDPYRIPLKPQTARLLRLFYYF    200
                     .||||..::|.||||:|||||||..||.||||::||.|..|||||||:||
BPUM_2260___r    151 QCVHCGQKEGQFHFSIRDNGFICQNCFSKDPYKLPLSPAAARLLRLFHYF    200

BSNT_03769___    201 DLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFLDQMESMKHLM    250
                     ||||||.|.:|.:||.|::||:|.||:||||||||||:|::||||||.||
BPUM_2260___r    201 DLSRLGQVDVKPQTKQEIRQVLDHYYDEYSGLYLKSKKFMNQMESMKKLM    250

BSNT_03769___    251 -GENKS    255
                      |||||
BPUM_2260___r    251 GGENKS    256


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