Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03767 and BPUM_2258

See DNA alignment / Visit BSNT_03767 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence pep-align/BSNT_03767___glyS.1.24716.seq
#    -bsequence pep-align/BPUM_2258___glyS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03767___glyS-BPUM_2258___glyS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03767___glyS-BPUM_2258___glyS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03767___glyS
# 2: BPUM_2258___glyS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 681
# Identity:     457/681 (67.1%)
# Similarity:   555/681 (81.5%)
# Gaps:           2/681 ( 0.3%)
# Score: 2379.5
# 
#
#=======================================

BSNT_03767___      1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNT     50
                     |:|||:|||||||||||||::||..|||:|:..|.|.:||:..:|.|||:
BPUM_2258___g      1 MNKQDVLLEIGLEEMPARFMSESTKQLGEKVKAWFKTQNISFEDVTLFNS     50

BSNT_03767___     51 PRRLAVFVKGVAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGA    100
                     ||||||.|.||||||:||||||||||||||.||:|||||||.||::||||
BPUM_2258___g     51 PRRLAVLVTGVAEKQEDIKEEAKGPAKKIAQDAEGNWTKAAEGFARGQGA    100

BSNT_03767___    101 NVEDLYIKEVKGIEYVFVQKFQAGQETKSLLPELSGLITSLHFPKNMRWG    150
                     :.:|||.||:||::||.||||:.|::.|.|||.|..:.|||.||||||||
BPUM_2258___g    101 STDDLYFKEIKGVDYVHVQKFEEGKQVKDLLPALGEIATSLSFPKNMRWG    150

BSNT_03767___    151 NEDLRYIRPIKWIVALFGQDVIPFSITNVESGRTTQGHRFLGHEVSIESP    200
                     ::||||||||||||.|||::::|..|..|:|||.|:||||||....|:||
BPUM_2258___g    151 SKDLRYIRPIKWIVCLFGEEIVPVDIAGVKSGRETRGHRFLGKAAIIDSP    200

BSNT_03767___    201 SAYEEQLKEQHVIADPSVRKQMIQSQLEAMAAENNWSIPVDEDLLDEVNH    250
                     ::||:.|::|.||||...|||.|..||.|:|:|..|.||||.:||:|||:
BPUM_2258___g    201 ASYEQTLRDQFVIADSDKRKQAITEQLNALASEKGWVIPVDPELLEEVNN    250

BSNT_03767___    251 LVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFPVKDKNGDLLPHFIT    300
                     ||||||.|.||||.|||::|||||||||||||||||||::.|:|||||||
BPUM_2258___g    251 LVEYPTVLSGSFEEEFLALPEEVLVTTMKEHQRYFPVKNEQGELLPHFIT    300

BSNT_03767___    301 VRNGNSHAIENVARGNEKVLRARLSDASFFYKEDQKLNIDANVKKLENIV    350
                     ||||||.|:||||||||||||||||||:||||||:||.|:.|:|||:.:|
BPUM_2258___g    301 VRNGNSEALENVARGNEKVLRARLSDAAFFYKEDEKLVIEDNIKKLDKVV    350

BSNT_03767___    351 FHEELGSLADKVRRVTSIAEKLAVRLQADEDTLKHVKRAAEISKFDLVTH    400
                     |||:||::.||::|||:||.:||..:.|||:|.:.|.|||.||||||||.
BPUM_2258___g    351 FHEKLGTIGDKLKRVTNIATRLAAHVGADEETTERVARAASISKFDLVTQ    400

BSNT_03767___    401 MIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGETPSTFTGA    450
                     |:|||||||||||||||:.|||.|.||.::|||||||.||.|.|||..||
BPUM_2258___g    401 MVYEFPELQGIMGEKYAKALGEHEEVAKSINEHYMPRFAGDEAPSTLIGA    450

BSNT_03767___    451 VVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISF    500
                     :||:|||||:|.|||||.||||||||||||||||||||.|||||:|.|||
BPUM_2258___g    451 IVAIADKLDSICSFFSIDVIPTGSQDPYGLRRQASGIVQILLDRHWNISF    500

BSNT_03767___    501 EELLTFVQTDK--EIELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEP    548
                     :|||...|.::  |..|::|.|.||||||.||.|||||:||||:..::||
BPUM_2258___g    501 KELLALAQVEEAHETALIEFLTHRLKYVLQAEHIRHDVVDAVLDVEDIEP    550

BSNT_03767___    549 YSALHKAQVLEQKLGAPGFKETAEALGRVISISKKGVRGDIQPDLFENEY    598
                     |:.:.||.|||:.:....||||||||||||||||||...:|||:|||||:
BPUM_2258___g    551 YAVVKKAAVLEESVKQESFKETAEALGRVISISKKGEDAEIQPELFENEH    600

BSNT_03767___    599 EAKLFDAYQTAKQNLQENFSKKDYEAALASLAALKEPIDAYFDHTMVIAD    648
                     |.||::|||..:..::|:.:...|.|||.:|..||.||..|||||||.||
BPUM_2258___g    601 EQKLYEAYQQVETAVKEHVAAGQYSAALEALDTLKTPIVHYFDHTMVHAD    650

BSNT_03767___    649 NESLKANRLAQMVSLADEIKSFANMNALIVK    679
                     :|.||.|||||||.||..|:||||||.||||
BPUM_2258___g    651 DEKLKRNRLAQMVKLAKVIQSFANMNNLIVK    681


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