Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03760 and BPUM_2254
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:17
# Commandline: needle
# -asequence pep-align/BSNT_03760___dnaG.1.24716.seq
# -bsequence pep-align/BPUM_2254___dnaG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03760___dnaG-BPUM_2254___dnaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03760___dnaG-BPUM_2254___dnaG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03760___dnaG
# 2: BPUM_2254___dnaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 609
# Identity: 461/609 (75.7%)
# Similarity: 534/609 (87.7%)
# Gaps: 6/609 ( 1.0%)
# Score: 2436.0
#
#
#=======================================
BSNT_03760___ 1 MGNRIPDEIVDQVQKSADIVEVIGDYVQLKKQGRNYFGLCPFHGESTPSF 50
|..|||||:::|:||:||||||||:||||:|||||||||||||||:||||
BPUM_2254___d 1 MSKRIPDELLEQIQKNADIVEVIGEYVQLRKQGRNYFGLCPFHGENTPSF 50
BSNT_03760___ 51 SVSPDKQIFHCFGCGAGGNVFSFLRQMEGYSFAESVSHLADKYQIDFPDD 100
|||.||||||||||||||||||||||||||||.|:|||:||||.||.||.
BPUM_2254___d 51 SVSADKQIFHCFGCGAGGNVFSFLRQMEGYSFIEAVSHVADKYHIDLPDH 100
BSNT_03760___ 101 I--TVHSGARPESSGEQKMAEAHELLKKFYHHLLINTKEGQEALDYLLSR 148
: ...|.:..|.:.:.||.||||||||||||||:||||||.|||||.:|
BPUM_2254___d 101 VANAQISSSHQEDTADHKMIEAHELLKKFYHHLLVNTKEGQNALDYLRAR 150
BSNT_03760___ 149 GFTKELIDEFQIGYALDSWDFITKFLVKRGFSEAQMEKAGLLIRREDGSG 198
|||.|.|.:|:||||||||||:||||.||||..|.||||||||:||:|:|
BPUM_2254___d 151 GFTDETIAKFEIGYALDSWDFVTKFLEKRGFDPAMMEKAGLLIQRENGTG 200
BSNT_03760___ 199 YFDRFRNRVMFPIHDHHGAVVAFSGRALGSQQPKYMNSPETPLFHKSKLL 248
:|||||:|||||||||||.|||||||:||.||||||||||||||||||||
BPUM_2254___d 201 FFDRFRDRVMFPIHDHHGTVVAFSGRSLGDQQPKYMNSPETPLFHKSKLL 250
BSNT_03760___ 249 YNFYKARLHIRKQERAVLFEGFADVISAVSSGVKESIATMGTSLTDDHVK 298
|:|:.||:||||:||||||||||||||||:|||.||:||||||||::|||
BPUM_2254___d 251 YHFHDARMHIRKRERAVLFEGFADVISAVTSGVGESVATMGTSLTEEHVK 300
BSNT_03760___ 299 ILRRNVEEIILCYDSDKAGYEATLKASELLQKKGCKVRVAMIPDGLDPDD 348
:|||||||||||||||.||||||:|||:||.|:|||||||||||||||||
BPUM_2254___d 301 LLRRNVEEIILCYDSDTAGYEATMKASDLLGKRGCKVRVAMIPDGLDPDD 350
BSNT_03760___ 349 YIKKFGGEKFKNDIIDASVTVMAFKMQYFRKGKNLSDEGDRLAYIKDVLK 398
||:|:|||||:|||||||||:|.|||.:||:|||||||||||:|:|.||:
BPUM_2254___d 351 YIRKYGGEKFRNDIIDASVTLMTFKMNFFRRGKNLSDEGDRLSYMKQVLR 400
BSNT_03760___ 399 EISTLSGSLEQEVYVKQLASEFSLSQESLTEQLSVFSKQNKPADNSGETK 448
|||.|:||||||:|:||||.|||:|.:||.|||.:|.||.:....|.:.:
BPUM_2254___d 401 EISRLNGSLEQEIYMKQLAGEFSISLDSLKEQLELFEKQQRQEAKSTQEE 450
BSNT_03760___ 449 T----RRAHLTTKARQKRLRPAYENAERLLLAHMLRDRSVIKKVIDRVGF 494
: |||||:|:.|:||||||||||||:||||||:...||:||:||||.
BPUM_2254___d 451 SGLEKRRAHLSTQVRRKRLRPAYENAERMLLAHMLKSDDVIRKVLDRVGI 500
BSNT_03760___ 495 QFNIDEHRALAAYLYAFYEEGAELTPQHLMARVTDDHISQLLSDILMLQV 544
:||||.|||||.|:||.||||.|.||||||.|:.||.|:|||:||.|:||
BPUM_2254___d 501 EFNIDSHRALATYIYALYEEGKEPTPQHLMNRIEDDVINQLLTDIFMIQV 550
BSNT_03760___ 545 NQELSEAELSDYVKKVLNQRNWSMIKEKEAERAEAERQKDFLRAASLAQE 594
..||||||||||||||||.||.|||||||.|||||||||||.:||:||:|
BPUM_2254___d 551 GDELSEAELSDYVKKVLNHRNLSMIKEKELERAEAERQKDFFKAATLAKE 600
BSNT_03760___ 595 IVTLNRSLK 603
|:.||||||
BPUM_2254___d 601 IIQLNRSLK 609
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