Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03756 and BPUM_2252

See DNA alignment / Visit BSNT_03756 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:17
# Commandline: needle
#    -asequence pep-align/BSNT_03756___cccA.1.24716.seq
#    -bsequence pep-align/BPUM_2252___cccA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03756___cccA-BPUM_2252___cccA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03756___cccA-BPUM_2252___cccA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03756___cccA
# 2: BPUM_2252___cccA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:      64/120 (53.3%)
# Similarity:    83/120 (69.2%)
# Gaps:          25/120 (20.8%)
# Score: 355.0
# 
#
#=======================================

BSNT_03756___      1 MKWNPLIPFLMIAVLGIGLTFFLSVKGLDDSREIASGGESKSAEKKDANA     50
                                             :|||.|..:||||||.:..| :.|||
BPUM_2252___c      1 ------------------------MKGLKDEDKIASGGEEQKQE-ETANA     25

BSNT_03756___     51 SPEEIYKANCIACHGENYEGVSGPSLKGVGDKKDVAEIKTKIEKGGNGMP    100
                     :|||:||.||::||||||||.:||:|||||||.:||:||.||::||||||
BPUM_2252___c     26 TPEELYKQNCLSCHGENYEGGAGPALKGVGDKLEVADIKKKIQEGGNGMP     75

BSNT_03756___    101 SGLVPADKLDDMAEWVSKIK    120
                     :||:|.:|||:|:|||||||
BPUM_2252___c     76 AGLIPNEKLDEMSEWVSKIK     95


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