Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03746 and BPUM_2246

See DNA alignment / Visit BSNT_03746 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:16
# Commandline: needle
#    -asequence pep-align/BSNT_03746___yqfS.1.24716.seq
#    -bsequence pep-align/BPUM_2246___nfo.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03746___yqfS-BPUM_2246___nfo.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03746___yqfS-BPUM_2246___nfo.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03746___yqfS
# 2: BPUM_2246___nfo
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     248/296 (83.8%)
# Similarity:   268/296 (90.5%)
# Gaps:           8/296 ( 2.7%)
# Score: 1308.0
# 
#
#=======================================

BSNT_03746___      1 --------MSGKHMLLAASQEAVSYGANTFMIYTGAPQNTRRKKIEDLNI     42
                             ||||||||||||||.|||:|||||||||||||||||||||||
BPUM_2246___n      1 MKIGSHVSMSGKHMLLAASQEAASYGSNTFMIYTGAPQNTRRKKIEDLNI     50

BSNT_03746___     43 EAGRAHMQENGIDEIIVHAPYIINIGNTTNPSTFELGVDFLRSEIERTAA     92
                     |||:|||:|:|:.:|:||||||||||||.||:||||||||||||||||.|
BPUM_2246___n     51 EAGQAHMKEHGMTDIVVHAPYIINIGNTVNPATFELGVDFLRSEIERTEA    100

BSNT_03746___     93 IGAKQIVLHPGAHVGAGAEAGIKKIIEGLNEVIDPNQNVQIALETMAGKG    142
                     :||:|||||||||||||.||||:||||||||||...|.||||||||||||
BPUM_2246___n    101 LGARQIVLHPGAHVGAGPEAGIQKIIEGLNEVIVKGQKVQIALETMAGKG    150

BSNT_03746___    143 SECGRSFEELAQIIEGVTHNEQLSVCFDTCHTHDAGYNIVEDFDGVLNEF    192
                     ||||||||||||||:||||||.|||||||||||||||.||.||||||.||
BPUM_2246___n    151 SECGRSFEELAQIIDGVTHNEALSVCFDTCHTHDAGYPIVTDFDGVLEEF    200

BSNT_03746___    193 DKIIGIDRIKVLHINDSKNVKGARKDRHENIGFGEIGFDALQYVVHHEQL    242
                     |:||||||||||||||||||:||||||||||||||||||||..:|||.||
BPUM_2246___n    201 DRIIGIDRIKVLHINDSKNVQGARKDRHENIGFGEIGFDALNNIVHHPQL    250

BSNT_03746___    243 KDIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQFDDTLLEKILQQ    288
                     :|:||||||||||||||||||||:|||.||||||||:.||:||..|
BPUM_2246___n    251 QDVPKILETPYVGEDKKNKKPPYKFEIAMLKEKQFDEGLLDKIKDQ    296


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.