Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00507 and BPUM_2243

See DNA alignment / Visit BSNT_00507 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:19
# Commandline: needle
#    -asequence pep-align/BSNT_00507___ycdI.1.24716.seq
#    -bsequence pep-align/BPUM_2243___ycdI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00507___ycdI-BPUM_2243___ycdI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00507___ycdI-BPUM_2243___ycdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00507___ycdI
# 2: BPUM_2243___ycdI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:      90/271 (33.2%)
# Similarity:   143/271 (52.8%)
# Gaps:          53/271 (19.6%)
# Score: 423.5
# 
#
#=======================================

BSNT_00507___      1 --MNLVSLKDIVFGYSHTPVLDKVSLDIESGEFVGITGPNGASKSTLIKV     48
                       ..::.:|||.:.|....|:|.:.|.:|.|.|:.:.||||:.|:||:|.
BPUM_2243___y      1 MAKPIIEMKDISYSYGQRNVIDHIHLTVEEGNFLALVGPNGSGKTTLLKC     50

BSNT_00507___     49 MLGMLKPWEGTVTISKRNTEGKRL----TIGYVPQQISSFNAGFPSTVLE     94
                     :||::||.:|.:.:.  .|...:.    .||:|.|:.:|||.|||::|.|
BPUM_2243___y     51 LLGLIKPQQGELKLF--GTPASKFKDWDQIGFVSQKANSFNTGFPASVYE     98

BSNT_00507___     95 LVQSGRYTKGKWFKRLNEEDHLEVEKALKMVEMWELRHRKIGDLSGGQKQ    144
                     :|.||...|...|||::::|..:||.|::.|.:.:|:|:.||:|||||:|
BPUM_2243___y     99 VVASGLTAKIGLFKRMSKQDKWQVEDAIRSVGIQDLKHQNIGELSGGQQQ    148

BSNT_00507___    145 KICIARMLASNPDLLMLDEPTTAVDYDSRKGFYEFMHHLVKNHNRTVVMV    194
                     :..|||.|.|.|.||:|||||..||..:.:|||:.:..|.|....::::|
BPUM_2243___y    149 RTFIARALVSQPKLLILDEPTVGVDQRTVEGFYQLLETLNKEKGMSLILV    198

BSNT_00507___    195 THEQNEVQQFLDKVIRLERGEKGGWKCL-----------TWNSCDELF--    231
                     ||:...|.   |||..:        .||           |::|.|:..  
BPUM_2243___y    199 THDVGTVS---DKVTHV--------ACLNQTLHFHGDAETFDSMDDQALS    237

BSNT_00507___    231 ---------------------    231
                                          
BPUM_2243___y    238 QFYGHDIQVIHHDHHHHGGHE    258


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