Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00509 and BPUM_2242

See DNA alignment / Visit BSNT_00509 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:19
# Commandline: needle
#    -asequence pep-align/BSNT_00509___yceA.1.24716.seq
#    -bsequence pep-align/BPUM_2242___yceA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00509___yceA-BPUM_2242___yceA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00509___yceA-BPUM_2242___yceA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00509___yceA
# 2: BPUM_2242___yceA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     110/292 (37.7%)
# Similarity:   171/292 (58.6%)
# Gaps:          18/292 ( 6.2%)
# Score: 485.5
# 
#
#=======================================

BSNT_00509___      1 --MEMFDLEFMRRAFLAGGMIAVMAPILGVYLVLRRQALMADTLSHISLS     48
                       ...|..||::.||:||.:|..:||:|||::|:||.:|:||.|||:||:
BPUM_2242___y      1 MLFPFFHYEFLQNAFIAGMLIGFIAPLLGVFIVVRRLSLIADALSHVSLA     50

BSNT_00509___     49 GVAIGFFLSTN---ITAAS-----IVVVTIGAIGIEYMRRAYRTYSEVSI     90
                     |:|...||...   :|..|     :.....|::.||.:|..|:.|.|::|
BPUM_2242___y     51 GIAASLFLDKKFGLLTGVSPLYLGMAFSVAGSLFIERLRSVYKHYQELAI    100

BSNT_00509___     91 AILMAAGLSFAMFLISLSKGTANMSIDQYLFGSLVTVNQQQVYIISIITL    140
                     .|:::.|:..::..|||:.| .|..:..|||||:..|::..::|:..|:|
BPUM_2242___y    101 PIILSGGIGISVIFISLANG-FNTDLFSYLFGSVSAVSRLDLWIVVGISL    149

BSNT_00509___    141 LILLYFIVLRRPLYLLTFDEATAKTSGINTNVLSLSFSIVTGLAISVIIP    190
                     :::|..::|.:.|:||:|||..||.|||:...:...|.:|..|.|:..:.
BPUM_2242___y    150 IVVLVVVLLYKELFLLSFDEEHAKASGISAKWIHFIFILVVALVIAASMR    199

BSNT_00509___    191 IIGVLLVSALLVLPAAFAIRIAKGFNMVFITAILISLFSVFTGLTSSYQL    240
                     |:|.||||||:.||.|.:|||||||......:||....||..||..||.|
BPUM_2242___y    200 IVGTLLVSALMTLPVAASIRIAKGFKQAIFLSILFGELSVLAGLILSYYL    249

BSNT_00509___    241 GTPPGPSITLLLIVLLLIGFAVQGVWTFIKKEAQRKKRHR--    280
                     ...||.:| ::|.:|:|||....|.:    |.....:|.|  
BPUM_2242___y    250 DLAPGGTI-VMLSILILIGCIFIGKF----KRGNHHERTRSA    286


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