Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03740 and BPUM_2236

See DNA alignment / Visit BSNT_03740 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:16
# Commandline: needle
#    -asequence pep-align/BSNT_03740___yqfX.1.24716.seq
#    -bsequence pep-align/BPUM_2236___yqfX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03740___yqfX-BPUM_2236___yqfX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03740___yqfX-BPUM_2236___yqfX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03740___yqfX
# 2: BPUM_2236___yqfX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:      70/159 (44.0%)
# Similarity:    96/159 (60.4%)
# Gaps:          40/159 (25.2%)
# Score: 331.0
# 
#
#=======================================

BSNT_03740___      1 MTLTEKFSKHESGKMDQTIKAPLIKQKGELKVANDYEKRDNNSYYVDHGS     50
                                                  ::...|:.:.|..   :|   
BPUM_2236___y      1 -----------------------------MERDEDFRRNDRE---ID---     15

BSNT_03740___     51 EGTNITRDNDGFFEETAAEIAEPYRAA-DRSNDQDNDRSDGNVNEGRGIG     99
                       |:.:.| ||:.|||||||||||:|: ||.:.::.|:. |:.:..:|||
BPUM_2236___y     16 --THFSND-DGYLEETAAEIAEPYQASRDRVDRRERDQV-GDDSGSKGIG     61

BSNT_03740___    100 YIALALSIISLFVLPVLLGAAGIIVGYIARRRGAQGLGAWAMGIGVVSLV    149
                     |.|||::||||||||||||.|.|:|||||||:||..||||::|||:||::
BPUM_2236___y     62 YTALAIAIISLFVLPVLLGVAAIVVGYIARRKGAHALGAWSIGIGIVSVI    111

BSNT_03740___    150 LGIFIIPFF    158
                     |||||.|||
BPUM_2236___y    112 LGIFITPFF    120


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