Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03739 and BPUM_2235
See
DNA alignment /
Visit
BSNT_03739 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence pep-align/BSNT_03739___ispG.1.24716.seq
# -bsequence pep-align/BPUM_2235___ispG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03739___ispG-BPUM_2235___ispG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03739___ispG-BPUM_2235___ispG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03739___ispG
# 2: BPUM_2235___ispG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity: 348/375 (92.8%)
# Similarity: 360/375 (96.0%)
# Gaps: 5/375 ( 1.3%)
# Score: 1748.0
#
#
#=======================================
BSNT_03739___ 1 MSEITHRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLA 50
|||:|||||||||||||||||||||||||||.||||||||||||||.||.
BPUM_2235___i 1 MSEVTHRTKTRPVKVGPLTIGGNNEVVIQSMATTKTHDVEATVAEIKRLE 50
BSNT_03739___ 51 EAGCQIVRVACPDERAANAIADIKKRISIPLVVDIHFDYKLALKAIEGGA 100
|||||||||||||||||||||||||:|:|||||||||||||||||||.||
BPUM_2235___i 51 EAGCQIVRVACPDERAANAIADIKKQINIPLVVDIHFDYKLALKAIEAGA 100
BSNT_03739___ 101 DKIRINPGNIGRREKVEAVVKAAKDKGIPIRIGVNAGSLEKRILEKYGYP 150
||||||||||||||||||||||||:||||||||||||||||:||:|||||
BPUM_2235___i 101 DKIRINPGNIGRREKVEAVVKAAKEKGIPIRIGVNAGSLEKKILDKYGYP 150
BSNT_03739___ 151 TADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAYEKAAKAFDYP 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2235___i 151 TADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAYEKAAKAFDYP 200
BSNT_03739___ 201 LHLGITESGTLFAGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAR 250
||||||||||||||||||||||||||:.|||||:||||||||||||||||
BPUM_2235___i 201 LHLGITESGTLFAGTVKSAAGLGAILNMGIGNTLRISLSADPVEEVKVAR 250
BSNT_03739___ 251 ELLKSFGLASNAATLISCPTCGRIEIDLISIANEVEEYISKIKAPIKVAV 300
|||||||||:||||||||||||||||||||||||||||||.|||||||||
BPUM_2235___i 251 ELLKSFGLAANAATLISCPTCGRIEIDLISIANEVEEYISTIKAPIKVAV 300
BSNT_03739___ 301 LGCAVNGPGEAREADIGIAGARGEGLLFRKGKIVRKVPEETMVEELKKEI 350
|||||||||||||||||||||||||||||||:||||||||||||||||||
BPUM_2235___i 301 LGCAVNGPGEAREADIGIAGARGEGLLFRKGEIVRKVPEETMVEELKKEI 350
BSNT_03739___ 351 DILAEEHYAKLEAEKAKLKEETQKA 375
|.:|||||||:||||||...
BPUM_2235___i 351 DKIAEEHYAKMEAEKAKANA----- 370
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.