Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03739 and BPUM_2235
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_03739___ispG.1.24716.seq
# -bsequence dna-align/BPUM_2235___ispG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03739___ispG-BPUM_2235___ispG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03739___ispG-BPUM_2235___ispG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03739___ispG
# 2: BPUM_2235___ispG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1129
# Identity: 884/1129 (78.3%)
# Similarity: 884/1129 (78.3%)
# Gaps: 17/1129 ( 1.5%)
# Score: 3488.0
#
#
#=======================================
BSNT_03739___ 1 GTGAGTGAAATCACACATCGTACAAAAACGCGTCCCGTCAAAGTGGGACC 50
|||||||||.|||||||||||||.||||||||||||||||||||||||||
BPUM_2235___i 1 GTGAGTGAAGTCACACATCGTACTAAAACGCGTCCCGTCAAAGTGGGACC 50
BSNT_03739___ 51 TTTAACAATAGGCGGCAACAATGAAGTTGTCATCCAAAGCATGACAACAA 100
||||||.|||||.||.||.|||||.||||||||.|||||.|||.||||||
BPUM_2235___i 51 TTTAACTATAGGTGGAAATAATGAGGTTGTCATTCAAAGTATGGCAACAA 100
BSNT_03739___ 101 CAAAAACACATGATGTAGAAGCAACGGTTGCGGAAATTAACCGTTTGGCT 150
|.||||||||||||||.|||||.||.||.||.||||||||.|||.|.|..
BPUM_2235___i 101 CCAAAACACATGATGTCGAAGCGACAGTAGCTGAAATTAAGCGTCTTGAA 150
BSNT_03739___ 151 GAAGCCGGTTGCCAAATCGTTCGGGTAGCATGTCCGGATGAACGGGCAGC 200
|||||.||.||.||||||||.||.||.|||||.||.||.||.||.|||||
BPUM_2235___i 151 GAAGCAGGCTGTCAAATCGTGCGTGTCGCATGCCCAGACGAGCGTGCAGC 200
BSNT_03739___ 201 AAACGCCATTGCGGATATTAAAAAGCGCATTTCCATTCCTCTTGTTGTTG 250
|||.||.|||||.||.||.|||||.|..||...|||.||.||||||||.|
BPUM_2235___i 201 AAATGCGATTGCAGACATAAAAAAACAAATCAACATCCCGCTTGTTGTCG 250
BSNT_03739___ 251 ACATACATTTCGATTATAAACTTGCGTTGAAAGCCATTGAAGGCGGCGCA 300
|.||.|||||.||.||.||.|||||..|||||||.|||||||..||.|||
BPUM_2235___i 251 ATATTCATTTTGACTACAAGCTTGCACTGAAAGCGATTGAAGCAGGTGCA 300
BSNT_03739___ 301 GATAAAATCCGCATCAACCCCGGCAACATCGGTCGACGTGAAAAAGTTGA 350
||.|||||.||.|||||.||.||.||||||||..||||.||||||||.||
BPUM_2235___i 301 GACAAAATTCGAATCAATCCAGGGAACATCGGAAGACGAGAAAAAGTCGA 350
BSNT_03739___ 351 AGCGGTTGTTAAAGCGGCCAAAGACAAAGGCATTCCGATCAGGATCGGAG 400
|||.|||||.|||||.||.|||||.|||||||||||.|||.|.||.||.|
BPUM_2235___i 351 AGCAGTTGTGAAAGCAGCAAAAGAAAAAGGCATTCCAATCCGTATTGGGG 400
BSNT_03739___ 401 TAAACGCCGGTTCATTGGAAAAACGCATTTTAGAAAAATACGGTTATCCG 450
|||||||.||||||||.||.|||...|||.|.||.|||||||||||.||.
BPUM_2235___i 401 TAAACGCTGGTTCATTAGAGAAAAAAATTCTTGATAAATACGGTTACCCA 450
BSNT_03739___ 451 ACTGCCGATGGAATGGTAGAAAGCGCACTTCATCACATTAAAATTCTTGA 500
||.||.|||||.|||||.|||||.|||||.||.|||||||||||||||||
BPUM_2235___i 451 ACAGCAGATGGTATGGTTGAAAGTGCACTGCACCACATTAAAATTCTTGA 500
BSNT_03739___ 501 GGATCTTGATTTTCACGATATTATTGTCAGCATGAAGGCCTCTGACGTGA 550
.|||||.||||||||.|||||.||.|||||||||||.||.|||||.||.|
BPUM_2235___i 501 AGATCTAGATTTTCATGATATCATCGTCAGCATGAAAGCATCTGATGTCA 550
BSNT_03739___ 551 ACCTTGCAATCGAGGCTTATGAAAAAGCGGCGAAAGCGTTTGACTACCCG 600
||||.||.||.|||||.|||||||||||.||.|||||.|||||||||||.
BPUM_2235___i 551 ACCTAGCGATTGAGGCATATGAAAAAGCAGCAAAAGCATTTGACTACCCT 600
BSNT_03739___ 601 CTTCACCTCGGGATCACCGAGTCAGGAACGCTGTTTGCCGGCACAGTAAA 650
||||||||.|||||.||.||.|||||.||..|.|||||.||.||.||.||
BPUM_2235___i 601 CTTCACCTTGGGATTACAGAATCAGGTACATTATTTGCAGGTACGGTCAA 650
BSNT_03739___ 651 GAGCGCAGCAGGACTCGGCGCCATTTTAAGCAAAGGCATCGGGAACACCA 700
.||.|||||.||.||.||.||.||.||.|..|..||.||.||||||||..
BPUM_2235___i 651 AAGTGCAGCTGGTCTAGGTGCTATCTTGAATATGGGGATTGGGAACACAC 700
BSNT_03739___ 701 TGCGCATTTCACTAAGCGCAGACCCTGTAGAAGAGGTAAAAGTAGCAAGG 750
|.|||||.|||.||||.||.||.||.||.|||||.||||||||||||.|.
BPUM_2235___i 701 TCCGCATCTCATTAAGTGCTGATCCAGTTGAAGAAGTAAAAGTAGCACGC 750
BSNT_03739___ 751 GAGCTTCTGAAATC-TTTCGGCTTAGCCTCCAATGCTGCCACGCTCATCT 799
||.||..||||||| |||.|.||| ||..|.|||||.||.||.||.||||
BPUM_2235___i 751 GAACTGTTGAAATCATTTGGTCTT-GCAGCAAATGCAGCAACACTGATCT 799
BSNT_03739___ 800 CATGTCCGACTTGCGGCCGTATTGAGATTGATCTAATCAGCATTGCCAAT 849
|.||.||.|||||.||.||.||.||.|||||.||.||.||||||||.|||
BPUM_2235___i 800 CTTGCCCAACTTGTGGACGAATCGAAATTGACCTCATTAGCATTGCAAAT 849
BSNT_03739___ 850 GAAGTGGAAGAGTATATTTCTAAGATAAAAGCGCCGATTAAAGTTGCTGT 899
|||||.|||||.|||||.||.|..||.|||||.|||||||||||.|||||
BPUM_2235___i 850 GAAGTCGAAGAATATATCTCCACAATTAAAGCACCGATTAAAGTAGCTGT 899
BSNT_03739___ 900 TCTCGGCTGCGCTGTAAACGGACCTGGTGAAGCGAGAGAAGCTGATATCG 949
|||.|||||.||||||||.||.||.||.||||||.|.||||||||.||||
BPUM_2235___i 900 TCTTGGCTGTGCTGTAAATGGTCCAGGGGAAGCGCGTGAAGCTGACATCG 949
BSNT_03739___ 950 GAATCGCCGGTGCACGCGGTGAAGGTCTGCTGTTCCGGAAAGGGAAAATT 999
||||.|||||.||..|.||.||||||||..|||||||.|||||..|||||
BPUM_2235___i 950 GAATTGCCGGCGCTAGAGGCGAAGGTCTATTGTTCCGTAAAGGTGAAATT 999
BSNT_03739___ 1000 GTCCGTAAGGTTCCAGAGGAAACGATGGTAGAAGAACTCAAAAAAGAAAT 1049
||.|||||.||.|||||.|||||||||||.||||||||.|||||||||||
BPUM_2235___i 1000 GTTCGTAAAGTACCAGAAGAAACGATGGTTGAAGAACTGAAAAAAGAAAT 1049
BSNT_03739___ 1050 TGACATTCTTGCTGAGGAACACTACGCAAAACTTGAAGCTGAAAAAGCAA 1099
.||.|...|||||||.||.|||||.||||||.|.||||||||||||||||
BPUM_2235___i 1050 CGATAAAATTGCTGAAGAGCACTATGCAAAAATGGAAGCTGAAAAAGCAA 1099
BSNT_03739___ 1100 AATTAAAAGAAGAAACACAAAAAGCTTGA 1128
||...||.|.|.||
BPUM_2235___i 1100 AAGCCAACGCATAA--------------- 1113
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