Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01985 and BPUM_2233
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_01985___yjcK.1.24716.seq
# -bsequence pep-align/BPUM_2233.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01985___yjcK-BPUM_2233.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01985___yjcK-BPUM_2233.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01985___yjcK
# 2: BPUM_2233
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 97/210 (46.2%)
# Similarity: 127/210 (60.5%)
# Gaps: 30/210 (14.3%)
# Score: 496.5
#
#
#=======================================
BSNT_01985___ 1 ---------------------------MLK--GKTIYVRPLEVTDAEENL 21
.|| |:.||||.|...||:..|
BPUM_2233 1 MSCNEFTFGGALLSIYHDYDKIRTGGEFLKKIGQHIYVRVLTEKDAQSLL 50
BSNT_01985___ 22 RLQSENRDFFEQFSMIRTDDYYTVEGQRKRITEYQERLEKDEEYHFGIFT 71
.|:.|||.:|:||:.:..||::|:..|.:||....||..:||.|..|||.
BPUM_2233 51 TLELENRSYFQQFTPLVKDDFFTLSRQIERIQRSVERCAQDEAYMHGIFL 100
BSNT_01985___ 72 ASDDRLIGTVSLFQIIRGALQTAFIGYFLDKAHNGKDIMTEAVRLVVDYA 121
...|.||||:||..::||.::.|::||.||:.|.||..||||:||::|||
BPUM_2233 101 NETDGLIGTISLSSVVRGPVEGAWLGYVLDEKHGGKGYMTEAIRLIIDYA 150
BSNT_01985___ 122 FHELKLHRIEAGVMPRNLGSMRVLEKAGFHKEGIARKNVKINGVWEDHQV 171
|.||.||||||||.|.|:||:|||||.||..||:.||.||||.|||||.:
BPUM_2233 151 FDELHLHRIEAGVKPSNIGSIRVLEKTGFENEGLNRKKVKINDVWEDHYL 200
BSNT_01985___ 172 LAILNPDDEQ 181
.||::||:.
BPUM_2233 201 FAIIHPDES- 209
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