Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03736 and BPUM_2232

See DNA alignment / Visit BSNT_03736 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:16
# Commandline: needle
#    -asequence pep-align/BSNT_03736___yqgB.1.24716.seq
#    -bsequence pep-align/BPUM_2232___yqgB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03736___yqgB-BPUM_2232___yqgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03736___yqgB-BPUM_2232___yqgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03736___yqgB
# 2: BPUM_2232___yqgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     123/256 (48.0%)
# Similarity:   176/256 (68.8%)
# Gaps:           3/256 ( 1.2%)
# Score: 662.0
# 
#
#=======================================

BSNT_03736___      1 MNVFQLFIKSTYSPRDIAKTRFQGIGKAILYVFLLSVLFAIPTAYYVSTG     50
                     ||||:|.:|..|||:||||.||.|||||||::|:||::.|:|..|::|..
BPUM_2232___y      1 MNVFKLLLKGIYSPKDIAKARFTGIGKAILFIFILSIIAAVPQGYHMSQE     50

BSNT_03736___     51 TVKSMNGFKTVLNKDFPDFTISNGKLQTDEKKATESQANGFVIVFDPTDS    100
                     ...:|:||:.|:.||.|||:|..||||.|:.:..|.:.||..|.|||.:.
BPUM_2232___y     51 ISNAMSGFQHVIKKDLPDFSIEKGKLQADQSEPIEKEENGITIFFDPAEK    100

BSNT_03736___    101 YGTEQIEAKQNAIGILQNKFVLAIDGQAQEMSYSMMPSELQKKDVIAGLN    150
                     ....::|:||.||.:::.|.|:|||||..::.|.::...|.|.::....|
BPUM_2232___y    101 IKASELESKQTAIALIKEKAVIAIDGQMTDIPYQLLGGTLTKDELARVTN    150

BSNT_03736___    151 QNKAMIVTVLSDLIFLVTAAGKFIEVSFLALIGLIIKNSQKKHLSYHQLW    200
                     ||:|:|:.|:..|::|.|||..||..:|||::|..||..|:|.||:..||
BPUM_2232___y    151 QNQAIIIPVICVLLYLSTAALMFISATFLAMLGTFIKRMQQKELSFQMLW    200

BSNT_03736___    201 KLSAYSITLSTVFFTIMRALEATVPSEFLLNWFVNFVILFLVLKEIPSKK    250
                     ||||||:||:||||.||.||...|.:.|||||.:||:.|:||:||||:|.
BPUM_2232___y    201 KLSAYSLTLTTVFFAIMSALNTPVANSFLLNWVINFIFLYLVVKEIPAKH    250

BSNT_03736___    251 AAV---    253
                     ..:   
BPUM_2232___y    251 KPLVKN    256


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