Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03729 and BPUM_2225

See DNA alignment / Visit BSNT_03729 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence pep-align/BSNT_03729___pstA.1.24716.seq
#    -bsequence pep-align/BPUM_2225___pstA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03729___pstA-BPUM_2225___pstA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03729___pstA-BPUM_2225___pstA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03729___pstA
# 2: BPUM_2225___pstA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     253/294 (86.1%)
# Similarity:   278/294 (94.6%)
# Gaps:           0/294 ( 0.0%)
# Score: 1316.0
# 
#
#=======================================

BSNT_03729___      1 MNRKITDKLATGMFGLCAAIIAAILVGLFSYIIINGVSQLSFQFITTKSS     50
                     ||.|:||:.||.:||||||||.|||||||||||.||..:|:|.|:||:||
BPUM_2225___p      1 MNSKMTDRFATFIFGLCAAIITAILVGLFSYIIFNGAKELNFDFLTTRSS     50

BSNT_03729___     51 AIAAGGGIRDQLFNSFYILFITMLITIPLGVGGGVFMAEYAPNNKVTDFI    100
                     ||.:||||||||||||||||||||||:||||||||:||||||.|||||||
BPUM_2225___p     51 AIGSGGGIRDQLFNSFYILFITMLITVPLGVGGGVYMAEYAPQNKVTDFI    100

BSNT_03729___    101 RTCIEVLSSLPSIVIGMFGLLMFVNLTGWGYTIIGGALALTVFNLPVMVR    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2225___p    101 RTCIEVLSSLPSIVIGMFGLLMFVNLTGWGYTIIGGALALTVFNLPVMVR    150

BSNT_03729___    151 VTEDAIRSVPKDLKEASLALGVSRWHTVKTVLIPSAIPSIITGAILASGR    200
                     |||||:||||||.|||||||||::||||||||||.|:|||||||||||||
BPUM_2225___p    151 VTEDALRSVPKDQKEASLALGVTKWHTVKTVLIPGALPSIITGAILASGR    200

BSNT_03729___    201 VFGEAAALLFTAGLTTPRLNFTEWNPFSETSPLNIFRPAETLAVHIWNVN    250
                     ||||||||||||||:||||:||.|:|||:|||||:|||||||||||||||
BPUM_2225___p    201 VFGEAAALLFTAGLSTPRLDFTNWSPFSDTSPLNVFRPAETLAVHIWNVN    250

BSNT_03729___    251 TQGMIPDAEAIANGGSAVLVISVLVFNLAARWLGTMIYKKLTAN    294
                     |||:||||||||||.|||||:|||:|||||||||:.|:||||:.
BPUM_2225___p    251 TQGIIPDAEAIANGASAVLVLSVLLFNLAARWLGSFIHKKLTSK    294


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